RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 KCNB1Q14721 858 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ARID5BQ14865 1188 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 SPATA2LQ8IUW3 424 aaPredicted RBP9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 MAP7D3Q8IWC1 876 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CCDC26Q8TAB7 109 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 POP1Q99575 1024 aaKnown RBP9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 TSPYL1Q9H0U9 437 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ZWILCHQ9H900 591 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 SYNPO2Q9UMS6 1093 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 SOWAHDA6NJG2 315 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 RHOBTB3O94955 611 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 HMBSP08397 361 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CLTAP09496 248 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 NBPF20Q3BBV1 942 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 KIAA1755Q5JYT7 1200 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 C8orf74Q6P047 294 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CAPN12Q6ZSI9 719 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ADSSL1Q8N142 457 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 PDCL2Q8N4E4 241 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CEP112Q8N8E3 955 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 BHMTQ93088 406 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 FAM81BQ96LP2 452 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CARD6Q9BX69 1037 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 RNPEPQ9H4A4 650 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ABI2Q9NYB9 513 aaPredicted RBP9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 HES2Q9Y543 173 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 TACC3Q9Y6A5 838 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 MYO7AQ13402 2215 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 LRRC53A6NM62 1247 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 LGALS16A8MUM7 142 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 PRPSAP2O60256 369 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 MYZAPP0CAP1 466 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CXCR5P32302 372 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 VAV2P52735 878 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ATP11AP98196 1134 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 NME3Q13232 169 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ELMO3Q96BJ8 720 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 TNIP3Q96KP6 325 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 CCDC77Q9BR77 488 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 SNTG2Q9NY99 539 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 PPP2R2CQ9Y2T4 447 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 ALS2Q96Q42 1657 aa9.07□□□□□ -0.96
CRNKL1-202ENST00000377340 POLR3GO15318 223 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 GAS2O43903 313 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 TOM1L1O75674 476 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 FTCDO95954 541 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 NAMPTP43490 491 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 GIT2Q14161 759 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 KCNK18Q7Z418 384 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 RFX6Q8HWS3 928 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 LRRC8AQ8IWT6 810 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF710Q8N1W2 664 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 HPDLQ96IR7 371 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 MTRF1LQ9UGC7 380 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 UBE4BO95155 1302 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SETD1AO15047 1707 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 OGTO15294 1046 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SLU7O95391 586 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 HLA-DRAP01903 254 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ASGR1P07306 291 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ARL4AP40617 200 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZBTB10Q96DT7 871 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 MAML3Q96JK9 1138 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZBTB45Q96K62 511 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 GDAP1L1Q96MZ0 367 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 FAM107BQ9H098 131 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 AGPAT3Q9NRZ7 376 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SLC38A7Q9NVC3 462 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 CNOT8Q9UFF9 292 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF214Q9UL59 606 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 STRCP1A6NGW2 1772 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 CXCL8P10145 99 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SLC9A1P19634 815 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 PSMC1P62191 440 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SGO2Q562F6 1265 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 NECAB2Q7Z6G3 386 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 RPUSD2Q8IZ73 545 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZNF784Q8NCA9 323 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 NKX2-3Q8TAU0 364 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SLC5A5Q92911 643 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 SPON2Q9BUD6 331 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 MTMR12Q9C0I1 747 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 NHEJ1Q9H9Q4 299 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 MRPL47Q9HD33 250 aaKnown RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ZMYND8Q9ULU4 1186 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 GRAP2O75791 330 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 PSMA2P25787 234 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 NUMBP49757 651 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 KIF11P52732 1056 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ITGA7Q13683 1181 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 KCNA10Q16322 511 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 PDZD4Q76G19 769 aaPredicted RBP9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 TRIM58Q8NG06 486 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 HSPH1Q92598 858 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 ENTPD7Q9NQZ7 604 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 COL20A1Q9P218 1284 aa9.06□□□□□ -0.96
CRNKL1-202ENST00000377340 GOLGA6CA6NDK9 693 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 GOLGA6BA6NDN3 693 aa9.05□□□□□ -0.96
CRNKL1-202ENST00000377340 KRIT1O00522 736 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms