RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 CYP2W1Q8TAV3 490 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 NAF1Q96HR8 494 aaKnown RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 PWWP2AQ96N64 755 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 PCDHB18PQ96TA0 734 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 YIPF3Q9GZM5 350 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 FRMD4BQ9Y2L6 1034 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 MSH4O15457 936 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 GAP43P17677 238 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 ATP5DP30049 168 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 RHBDF2Q6PJF5 856 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 FAM47EQ6ZV65 393 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 AGPAT3Q9NRZ7 376 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 NARFQ9UHQ1 456 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 VAV3Q9UKW4 847 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 GAKO14976 1311 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 SPOPO43791 374 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 CHRNB2P17787 502 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 FOXN2P32314 431 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 RNASELQ05823 741 aaKnown RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 GRAPQ13588 217 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 Q4G0T1 1027 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 TRIM68Q6AZZ1 485 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 GRAPLQ8TC17 118 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 DDX4Q9NQI0 724 aaKnown RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 ASIC3Q9UHC3 531 aa17.69■□□□□ 0.42
TRIM39-201ENST00000376656 ZMYND8Q9ULU4 1186 aaPredicted RBP17.69■□□□□ 0.42
TRIM39-201ENST00000376656 LIN7AO14910 233 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 CLDN3O15551 220 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 TTC4O95801 387 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 TAL1P17542 331 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 GPSM2P81274 684 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 MTFR1Q15390 333 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 TRIP13Q15645 432 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 SRRM1Q8IYB3 904 aaKnown RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 FAM163AQ96GL9 167 aaPredicted RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 MAGEB18Q96M61 343 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 DAGLAQ9Y4D2 1042 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 A6NHS1 94 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 TBX3O15119 743 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 WFS1O76024 890 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 TAC1P20366 129 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 SKIV2L2P42285 1042 aaKnown RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 NFIL3Q16649 462 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 MOV10L1Q9BXT6 1211 aaKnown RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 OSBPL1AQ9BXW6 950 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 MYLK2Q9H1R3 596 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 SPATS2LQ9NUQ6 558 aaKnown RBP17.68■□□□□ 0.42
TRIM39-201ENST00000376656 DMAC2Q9NW81 257 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 WHRNQ9P202 907 aa17.68■□□□□ 0.42
TRIM39-201ENST00000376656 DLG4P78352 724 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 MKRN3Q13064 507 aaKnown RBP17.67■□□□□ 0.42
TRIM39-201ENST00000376656 TCEAL1Q15170 157 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 C12orf50Q8NA57 414 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-201ENST00000376656 TMEM237Q96Q45 408 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 FIZ1Q96SL8 496 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 GLT8D2Q9H1C3 349 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 LRRC19Q9H756 370 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 ACP6Q9NPH0 428 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 UFL1O94874 794 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 GNAZP19086 355 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 SHMT1P34896 483 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 HS2ST1Q7LGA3 356 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 FBF1Q8TES7 1133 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 C7orf43Q8WVR3 580 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 KAT5Q92993 513 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.67■□□□□ 0.42
TRIM39-201ENST00000376656 ZFATQ9P243 1243 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 HIP1RO75146 1068 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 SGPL1O95470 568 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 CALRP27797 417 aaKnown RBP17.67■□□□□ 0.42
TRIM39-201ENST00000376656 BFSP1Q12934 665 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 AP3B2Q13367 1082 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 ATG4AQ8WYN0 398 aa17.67■□□□□ 0.42
TRIM39-201ENST00000376656 RAB3IPQ96QF0 476 aaPredicted RBP17.67■□□□□ 0.42
TRIM39-201ENST00000376656 C10orf71Q711Q0 1435 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 THAP12O43422 761 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 LUC7L3O95232 432 aaKnown RBP17.66■□□□□ 0.42
TRIM39-201ENST00000376656 BCRP11274 1271 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 INHBEP58166 350 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 C1orf186Q6ZWK4 172 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 ZNF564Q8TBZ8 553 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-201ENST00000376656 POLR3CQ9BUI4 534 aaPredicted RBP17.66■□□□□ 0.42
TRIM39-201ENST00000376656 PITPNM3Q9BZ71 974 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 PARVGQ9HBI0 331 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 CHST7Q9NS84 486 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 NINJ2Q9NZG7 142 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 SERPINB13Q9UIV8 391 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 ITGA8P53708 1063 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 ICA1Q05084 483 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 CCDC15Q0P6D6 951 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 SGO2Q562F6 1265 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 NSMFQ6X4W1 530 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 ARHGEF18Q6ZSZ5 1173 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 ZNF720Q7Z2F6 126 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 TPH2Q8IWU9 490 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 FAM20AQ96MK3 541 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 NUP85Q9BW27 656 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 NKIRAS1Q9NYS0 192 aa17.66■□□□□ 0.42
TRIM39-201ENST00000376656 NAALADL1Q9UQQ1 740 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms