RNA–Protein interactions for RNA: ENST00000375887.8

TNFSF13B-201, Transcript of TNF superfamily member 13b, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-201ENST00000375887 ADSSP30520 456 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 NBPF9Q3BBW0 867 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 GKAP1Q5VSY0 366 aaPredicted RBP13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 HAUS6Q7Z4H7 955 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 HOOK3Q86VS8 718 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 FMNL3Q8IVF7 1028 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 PPM1KQ8N3J5 372 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCT6BQ92526 530 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 CCDC114Q96M63 670 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 SELENOSQ9BQE4 189 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 NUP85Q9BW27 656 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 CNOT10Q9H9A5 744 aaKnown RBP13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 KLC4Q9NSK0 619 aa13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 DBR1Q9UK59 544 aaKnown RBP13.33□□□□□ -0.27
TNFSF13B-201ENST00000375887 PLS3P13797 630 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 COILP38432 576 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 MXI1P50539 228 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 SETQ01105 290 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 UGCGQ16739 394 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 SLC13A5Q86YT5 568 aaPredicted RBP13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 CHURC1Q8WUH1 139 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 CENPTQ96BT3 561 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 ACCSQ96QU6 501 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 TMEM206Q9H813 350 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 HOMER2Q9NSB8 354 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 HERC5Q9UII4 1024 aaKnown RBP13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 RASAL2Q9UJF2 1139 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 SYNPO2Q9UMS6 1093 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 PFASO15067 1338 aa13.33□□□□□ -0.28
TNFSF13B-201ENST00000375887 CCDC169A6NNP5 214 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 P4HBP07237 508 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 IBSPP21815 317 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 SCTRP47872 440 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 DRP2Q13474 957 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 RASA3Q14644 834 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 CCDC38Q502W7 563 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 CCDC105Q8IYK2 499 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 DHX38Q92620 1227 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 CCDC127Q96BQ5 260 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 SAAL1Q96ER3 474 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 KIFC3Q9BVG8 833 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 HAUS2Q9NVX0 235 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 ZNF536O15090 1300 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 ZNF646O15015 1829 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 PODXLO00592 558 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 P4HA2O15460 535 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 RGS16O15492 202 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 RIPK2O43353 540 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 GRIN3BO60391 1043 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 MTA2O94776 668 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 GZMAP12544 262 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 PEX3P56589 373 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 MRPS9P82933 396 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 GTF2BQ00403 316 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 CETN1Q12798 172 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 PLCB4Q15147 1175 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 CYP1B1Q16678 543 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 C12orf56Q8IXR9 622 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 ZNF564Q8TBZ8 553 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 ART4Q93070 314 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 TRIM7Q9C029 511 aa13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 TOPORSQ9NS56 1045 aaPredicted RBP13.32□□□□□ -0.28
TNFSF13B-201ENST00000375887 FOXO6A8MYZ6 492 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SPOPO43791 374 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SORBS3O60504 671 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 RAD17O75943 681 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CYP1A2P05177 515 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 TRAF1Q13077 416 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 AUHQ13825 339 aaKnown RBP13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 LRRC34Q8IZ02 419 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 FUKQ8N0W3 1084 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CPXCR1Q8N123 301 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 HELQQ8TDG4 1101 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 TMEM174Q8WUU8 243 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 C1orf54Q8WWF1 131 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SHC3Q92529 594 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 AKT1S1Q96B36 256 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 PRMT1Q99873 361 aaKnown RBP13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 WNT8AQ9H1J5 351 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 VEZTQ9HBM0 779 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 AAASQ9NRG9 546 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CNOT7Q9UIV1 285 aaKnown RBP13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SPDYE2BA6NHP3 402 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CLDN3O15551 220 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SPDYE6P0CI01 402 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CYP11B1P15538 503 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CREB1P16220 341 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 HSPA6P17066 643 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 HSD17B4P51659 736 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SOX10P56693 466 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 C2CD6Q53TS8 623 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 TNFAIP8L3Q5GJ75 292 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 SEL1L2Q5TEA6 688 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 FAM228AQ86W67 206 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 CCDC25Q86WR0 208 aa13.31□□□□□ -0.28
TNFSF13B-201ENST00000375887 C7orf43Q8WVR3 580 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms