RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 TNIP2Q8NFZ5 429 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 DNAJC9Q8WXX5 260 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 FRMD5Q7Z6J6 570 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 REREQ9P2R6 1566 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 SLC10A5Q5PT55 438 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 FBXW10Q5XX13 1052 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 DPY19L2Q6NUT2 758 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 B4GALNT2Q8NHY0 566 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 AIFM3Q96NN9 605 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 MTO1Q9Y2Z2 717 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 CHN1P15882 459 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 LSP1P33241 339 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 MAPK6Q16659 721 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 RNF25Q96BH1 459 aaPredicted RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 FOXP3Q9BZS1 431 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 ZNF556Q9HAH1 456 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 MARK3P27448 753 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 KPNB1Q14974 876 aaKnown RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 ELMSAN1Q6PJG2 1045 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 CYGBQ8WWM9 190 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 EGFL8Q99944 293 aa10.39□□□□□ -0.75
SPEN-201ENST00000375759 CDK12Q9NYV4 1490 aaPredicted RBP10.39□□□□□ -0.75
SPEN-201ENST00000375759 NCK2O43639 380 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 SEC24DO94855 1032 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 SUPT20HL1Q3ZLR7 823 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 SEC16BQ96JE7 1060 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 FAM20AQ96MK3 541 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 DIABLOQ9NR28 239 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 ZNF211Q13398 564 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 Q3C1V9 767 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 GUF1Q8N442 669 aaKnown RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 TSPOAP1O95153 1857 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 MTMR1Q13613 665 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 CLEC17AQ6ZS10 378 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 RHPN2Q8IUC4 686 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ZHX2Q9Y6X8 837 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 HSPA13P48723 471 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 EFHC2Q5JST6 749 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 CLEC4FQ8N1N0 589 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 CEP95Q96GE4 821 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 AMACRQ9UHK6 382 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 USP17L3A6NCW0 530 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 USP17L4A6NCW7 530 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ENO4A6NNW6 628 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 TOB2Q14106 344 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 USP17L1Q7RTZ2 530 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ABHD8Q96I13 439 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 BBOX1O75936 387 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 KRR1Q13601 381 aaKnown RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 TRAF7Q6Q0C0 670 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 MAD2L2Q9UI95 211 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 AKAP10O43572 662 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 PRKAB2O43741 272 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 RTN2O75298 545 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 HOXA13P31271 388 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 CDK8P49336 464 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 TMEM245Q9H330 911 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 PSMC3IPQ9P2W1 217 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 ZNF263O14978 683 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 RNF135Q8IUD6 432 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 RIBC1Q8N443 379 aaPredicted RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 C11orf70Q9BRQ4 267 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ZBTB5O15062 677 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 VSNL1P62760 191 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 TEKT4Q8WW24 435 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 ORAI2Q96SN7 254 aa10.38□□□□□ -0.75
SPEN-201ENST00000375759 FAM32AQ9Y421 112 aaKnown RBP10.38□□□□□ -0.75
SPEN-201ENST00000375759 HUS1O60921 280 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 USP17L8P0C7I0 530 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 GPC3P51654 580 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 DTX3LQ8TDB6 740 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SP110Q9HB58 689 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 AIPL1Q9NZN9 384 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 EIF4E1BA6NMX2 242 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 M0R3G1 203 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ADCY3O60266 1144 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PHF2O75151 1096 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PLEKHA8P1O95397 391 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PYGMP11217 842 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SERPINB3P29508 390 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PHKA2P46019 1235 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 WDR24Q96S15 920 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 PRPF18Q99633 342 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 SH3GL2Q99962 352 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ITM2BQ9Y287 266 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 LZTS3O60299 673 aaPredicted RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 WBP4O75554 376 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 SLC27A3Q5K4L6 730 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 OLFML2BQ68BL8 750 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 RASGRP2Q7LDG7 609 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SETD3Q86TU7 594 aaPredicted RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 HORMAD1Q86X24 394 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SFR1Q86XK3 245 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 ARHGEF1Q92888 912 aaKnown RBP10.37□□□□□ -0.75
SPEN-201ENST00000375759 FAM129AQ9BZQ8 928 aa10.37□□□□□ -0.75
SPEN-201ENST00000375759 SARS2Q9NP81 518 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms