RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SRGAP1Q7Z6B7 1085 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 HDAC7Q8WUI4 952 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 FAM20AQ96MK3 541 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 NLRP4Q96MN2 994 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 HERC2P3Q9BVR0 1158 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 EPS15L1Q9UBC2 864 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 VAV3Q9UKW4 847 aa13.51□□□□□ -0.25
LSM2-208ENST00000375661 DDX11L8A8MPP1 907 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 NRP1O14786 923 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 GAS2O43903 313 aaKnown RBP13.5□□□□□ -0.25
LSM2-208ENST00000375661 NCLP19338 710 aaKnown RBP13.5□□□□□ -0.25
LSM2-208ENST00000375661 PCBP1Q15365 356 aaKnown RBP eCLIP13.5□□□□□ -0.258e-7■■■■□ 20.5
LSM2-208ENST00000375661 CALCRLQ16602 461 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 ANO5Q75V66 913 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 SLC7A3Q8WY07 619 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 RPS6KC1Q96S38 1066 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 MAN1C1Q9NR34 630 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 COL4A3BPQ9Y5P4 624 aa13.5□□□□□ -0.25
LSM2-208ENST00000375661 MIA3Q5JRA6 1907 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 CLUHO75153 1309 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 CCDC195A0A1B0GUA6 201 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 TMEM150BA6NC51 233 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 EML1O00423 815 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 INPPL1O15357 1258 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 ASAP2O43150 1006 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 B4GALT3O60512 393 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 GLUD1P00367 558 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 LMNAP02545 664 aaKnown RBP13.49□□□□□ -0.25
LSM2-208ENST00000375661 SSBP05455 408 aaKnown RBP eCLIP13.49□□□□□ -0.25
LSM2-208ENST00000375661 OR52Z1P0C646 297 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 SRFP11831 508 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 TXKP42681 527 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 SPIRE1Q08AE8 756 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 PTGDRQ13258 359 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 KSR1Q8IVT5 923 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 GPR65Q8IYL9 337 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 SLFN12Q8IYM2 578 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 RNF168Q8IYW5 571 aaPredicted RBP13.49□□□□□ -0.25
LSM2-208ENST00000375661 FEZF2Q8TBJ5 459 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 RXFP1Q9HBX9 757 aa13.49□□□□□ -0.25
LSM2-208ENST00000375661 STK25O00506 426 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 MARCH6O60337 910 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 BAG4O95429 457 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 EFEMP2O95967 443 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 RFX1P22670 979 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 AXLP30530 894 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 HOXA11P31270 313 aaPredicted RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 GBP2P32456 591 aaPredicted RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 RFC5P40937 340 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 QARSP47897 775 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 PPP2R5CQ13362 524 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 PTPAQ15257 358 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 SF3A1Q15459 793 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 IL17AQ16552 155 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 UBXN11Q5T124 520 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 PHLDB3Q6NSJ2 640 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 ZC3H14Q6PJT7 736 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 COLGALT2Q8IYK4 626 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 SLC44A3Q8N4M1 653 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 TCP11Q8WWU5 503 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 PSPC1Q8WXF1 523 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 CCDC51Q96ER9 411 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 USP28Q96RU2 1077 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 SH2D3AQ9BRG2 576 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 PLEKHA4Q9H4M7 779 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 DHX33Q9H6R0 707 aaKnown RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
LSM2-208ENST00000375661 ZDHHC7Q9NXF8 308 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.48□□□□□ -0.25
LSM2-208ENST00000375661 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 CLIC4Q9Y696 253 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 MYH15Q9Y2K3 1946 aa13.48□□□□□ -0.25
LSM2-208ENST00000375661 KRBA1A5PL33 1030 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 TEX28O15482 410 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 NR1I2O75469 434 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 POMCP01189 267 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 CFHP08603 1231 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 ITGA4P13612 1032 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 GLUD2P49448 558 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 DSG1Q02413 1049 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 KCNG4Q8TDN1 519 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 PRPF31Q8WWY3 499 aaKnown RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 SMG7Q92540 1137 aaKnown RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 BORCS6Q96GS4 357 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.47□□□□□ -0.25
LSM2-208ENST00000375661 MARCH5Q9NX47 278 aa13.47□□□□□ -0.25
LSM2-208ENST00000375661 DAXXQ9UER7 740 aaPredicted RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 ZFP37Q9Y6Q3 630 aaPredicted RBP13.47□□□□□ -0.25
LSM2-208ENST00000375661 DMDP11532 3685 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 VPS13AQ96RL7 3174 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 LAD1O00515 517 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 C2CD2LO14523 706 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 ERLIN2O94905 339 aa13.46□□□□□ -0.25
LSM2-208ENST00000375661 P4HBP07237 508 aaKnown RBP13.46□□□□□ -0.25
LSM2-208ENST00000375661 SRGAP2CP0DJJ0 459 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms