RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 PTGDRQ13258 359 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 TFDP1Q14186 410 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 PTPN21Q16825 1174 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 CDCA2Q69YH5 1023 aaPredicted RBP15.8■□□□□ 0.12
UBXN11-207ENST00000374223 SPATA31D4Q6ZUB0 917 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 RNF168Q8IYW5 571 aaPredicted RBP15.8■□□□□ 0.12
UBXN11-207ENST00000374223 TMEM130Q8N3G9 435 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 FAM184AQ8NB25 1140 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 ASIC4Q96FT7 647 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 CCDC43Q96MW1 224 aaKnown RBP15.8■□□□□ 0.12
UBXN11-207ENST00000374223 FAM193BQ96PV7 902 aaPredicted RBP15.8■□□□□ 0.12
UBXN11-207ENST00000374223 NACC1Q96RE7 527 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 PHOX2BQ99453 314 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 TMEM175Q9BSA9 504 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 MMTAG2Q9BU76 263 aaKnown RBP15.8■□□□□ 0.12
UBXN11-207ENST00000374223 CCDC113Q9H0I3 377 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 ADAM7Q9H2U9 754 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 FZD8Q9H461 694 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 PDZD7Q9H5P4 517 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 SNTG2Q9NY99 539 aa15.8■□□□□ 0.12
UBXN11-207ENST00000374223 PTGESO14684 152 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 ST18O60284 1047 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 HOXB8P17481 243 aaPredicted RBP15.79■□□□□ 0.12
UBXN11-207ENST00000374223 RPL17P18621 184 aaKnown RBP15.79■□□□□ 0.12
UBXN11-207ENST00000374223 CYP11B2P19099 503 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 AXLP30530 894 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 CCT6AP40227 531 aaKnown RBP15.79■□□□□ 0.12
UBXN11-207ENST00000374223 NT5DC1Q5TFE4 455 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 KIAA0319Q5VV43 1072 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 GLYCTKQ8IVS8 523 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 HASPINQ8TF76 798 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 NFKBIZQ9BYH8 718 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 BHMT2Q9H2M3 363 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 PARP2Q9UGN5 583 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 KIAA1024Q9UPX6 916 aa15.79■□□□□ 0.12
UBXN11-207ENST00000374223 ARHGEF35A5YM69 484 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 TEX28O15482 410 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 KLRC2P26717 231 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 FXR2P51116 673 aaKnown RBP eCLIP15.78■□□□□ 0.12
UBXN11-207ENST00000374223 NUBP1P53384 320 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 HMGN5P82970 282 aaKnown RBP15.78■□□□□ 0.12
UBXN11-207ENST00000374223 NAB2Q15742 525 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 SLC27A1Q6PCB7 646 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 DAW1Q8N136 415 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 RUSC1Q9BVN2 902 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 HERC2P3Q9BVR0 1158 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 SH2B1Q9NRF2 756 aaPredicted RBP15.78■□□□□ 0.12
UBXN11-207ENST00000374223 DDX19AQ9NUU7 478 aaKnown RBP15.78■□□□□ 0.12
UBXN11-207ENST00000374223 KANSL3Q9P2N6 904 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 LRWD1Q9UFC0 647 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 CITO14578 2027 aa15.78■□□□□ 0.12
UBXN11-207ENST00000374223 CASTOR2A6NHX0 329 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 SOD2P04179 222 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 PRKCBP05771 671 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 CENPBP07199 599 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 AVPR2P30518 371 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 VCPP55072 806 aaKnown RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 PRSS55Q6UWB4 352 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 TAS1R3Q7RTX0 852 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 ST13P5Q8NFI4 369 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 LRRC15Q8TF66 581 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 CCDC51Q96ER9 411 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 TMX3Q96JJ7 454 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 PLIN2Q99541 437 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 TRIM6Q9C030 488 aaPredicted RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 LIMD1Q9UGP4 676 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 GIT1Q9Y2X7 761 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 NR2E1Q9Y466 385 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 NOTCH4Q99466 2003 aa15.77■□□□□ 0.12
UBXN11-207ENST00000374223 PDCD11Q14690 1871 aaKnown RBP15.77■□□□□ 0.12
UBXN11-207ENST00000374223 SFI1A8K8P3 1242 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 N4BP1O75113 896 aaKnown RBP15.76■□□□□ 0.11
UBXN11-207ENST00000374223 RFPL2O75678 378 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 BRD1O95696 1058 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 MAPK7Q13164 816 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 GNL2Q13823 731 aaKnown RBP15.76■□□□□ 0.11
UBXN11-207ENST00000374223 FAM187BQ17R55 369 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 TPRNQ4KMQ1 711 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 KIAA1841Q6NSI8 718 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 ZBTB33Q86T24 672 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 CEP120Q8N960 986 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 IGSF22Q8N9C0 903 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 KREMEN2Q8NCW0 462 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 CNNM3Q8NE01 707 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 MCPH1Q8NEM0 835 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 SNX29Q8TEQ0 813 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 NECTIN4Q96NY8 510 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 PNMA5Q96PV4 448 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 RPS6KC1Q96S38 1066 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 GDAQ9Y2T3 454 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 USP34Q70CQ2 3546 aa15.76■□□□□ 0.11
UBXN11-207ENST00000374223 MEFVO15553 781 aaPredicted RBP15.75■□□□□ 0.11
UBXN11-207ENST00000374223 RECQL4O94761 1208 aa15.75■□□□□ 0.11
UBXN11-207ENST00000374223 GJB2P29033 226 aa15.75■□□□□ 0.11
UBXN11-207ENST00000374223 ITIH3Q06033 890 aa15.75■□□□□ 0.11
UBXN11-207ENST00000374223 PRPF4BQ13523 1007 aaKnown RBP15.75■□□□□ 0.11
UBXN11-207ENST00000374223 GLRA4Q5JXX5 417 aa15.75■□□□□ 0.11
UBXN11-207ENST00000374223 RTP2Q5QGT7 225 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms