RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 SNCAIPQ9Y6H5 919 aa9.42□□□□□ -0.9
SNRNP40-202ENST00000373720 CAPN6Q9Y6Q1 641 aa9.42□□□□□ -0.9
SNRNP40-202ENST00000373720 RLFQ13129 1914 aa9.42□□□□□ -0.9
SNRNP40-202ENST00000373720 A0A0G2JMZ2 1700 aa9.42□□□□□ -0.9
SNRNP40-202ENST00000373720 EMSYQ7Z589 1322 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 K7ERI5 159 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 DDX39AO00148 427 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 PGRMC1O00264 195 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 ENC1O14682 589 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 NDC80O14777 642 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 HNRNPDLO14979 420 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 OPA1O60313 960 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 MAFO75444 373 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 PALMO75781 387 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 KIF4AO95239 1232 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC34A2O95436 690 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 KLRC1P26715 233 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 ARL2P36404 184 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 NOP2P46087 812 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 GCLCP48506 637 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 YWHAEP62258 255 aaKnown RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 PRKCEQ02156 737 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 KCNA1Q09470 495 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 VGLL4Q14135 290 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 TFDP1Q14186 410 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 NAA30Q147X3 362 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 C8orf74Q6P047 294 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 APBB1IPQ7Z5R6 666 aaPredicted RBP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 MREGQ8N565 214 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 LRRC57Q8N9N7 239 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 TPCN2Q8NHX9 752 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 COG1Q8WTW3 980 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 POMGNT1Q8WZA1 660 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 CAVIN3Q969G5 261 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 EXOC4Q96A65 974 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 HES6Q96HZ4 224 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 FNBP1Q96RU3 617 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 HOMER3Q9NSC5 361 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 ZNF446Q9NWS9 450 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 RAB20Q9NX57 234 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 TMEM59LQ9UK28 342 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 PCDHB2Q9Y5E7 798 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 DUSP10Q9Y6W6 482 aa9.41□□□□□ -0.9
SNRNP40-202ENST00000373720 SYNGAP1Q96PV0 1343 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CCDC66A2RUB6 948 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC16A4O15374 487 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 MAGEB2O15479 319 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 LGR5O75473 907 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 RGS20O76081 388 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 ERLIN2O94905 339 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 MAN1A1P33908 653 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 SLC1A1P43005 524 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 LIG4P49917 911 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 PDE6CP51160 858 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 STAT5BP51692 787 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 HIRAP54198 1017 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 DRG2P55039 364 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CYP24A1Q07973 514 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 PAK2Q13177 524 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 SNAPC2Q13487 334 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 PLS1Q14651 629 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CASP8Q14790 479 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 EMC2Q15006 297 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TARBP2Q15633 366 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CBWD6Q4V339 395 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CBWD3Q5JTY5 395 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 CBWD5Q5RIA9 395 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TAF3Q5VWG9 929 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 USP38Q8NB14 1042 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 DEPTORQ8TB45 409 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TRPM4Q8TD43 1214 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 PSPC1Q8WXF1 523 aaKnown RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 EMID1Q96A84 441 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TSPAN18Q96SJ8 248 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 ZNF518BQ9C0D4 1074 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TMEM117Q9H0C3 514 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 WNT8AQ9H1J5 351 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 SMARCAD1Q9H4L7 1026 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 ABCB6Q9NP58 842 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 UBE2TQ9NPD8 197 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 AVENQ9NQS1 362 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 C1orf112Q9NSG2 853 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 TRIM10Q9UDY6 481 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 PARP2Q9UGN5 583 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 SEPT9Q9UHD8 586 aaPredicted RBP9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 MYH11P35749 1972 aa9.4□□□□□ -0.9
SNRNP40-202ENST00000373720 COL1A2P08123 1366 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 DNAJC25-GNG10A0A024R161 153 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 DDX3XO00571 662 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ZBTB39O15060 712 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 NKRFO15226 690 aaKnown RBP eCLIP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ADCY3O60266 1144 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ZNF862O60290 1169 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 FARP2O94887 1054 aaPredicted RBP9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ABL1P00519 1130 aa9.39□□□□□ -0.91
SNRNP40-202ENST00000373720 ACTN1P12814 892 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms