RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 KLRK1P26718 216 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 GPC5P78333 572 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 ART3Q13508 389 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 NAALADL2Q58DX5 795 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 C9orf131Q5VYM1 1079 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 HAUS6Q7Z4H7 955 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 LCMT1Q9UIC8 334 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 KIDINS220Q9ULH0 1771 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 RARBP10826 455 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 PAMP19021 973 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 APBA1Q02410 837 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 GFPT1Q06210 699 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 LMBRD2Q68DH5 695 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 KRT39Q6A163 491 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 ANKRD13AQ8IZ07 590 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 SIX5Q8N196 739 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 VMP1Q96GC9 406 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 DONSONQ9NYP3 566 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 CPSF2Q9P2I0 782 aaKnown RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 PALMO75781 387 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 MT-ND3P03897 115 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 RASA1P20936 1047 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 EPHB4P54760 987 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 PSMC1P62191 440 aaKnown RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 NUP85Q9BW27 656 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 SENP1Q9P0U3 644 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 NRXN1Q9ULB1 1477 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 NMT1P30419 496 aaKnown RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 AP3M2P53677 418 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 FCGRTP55899 365 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 VEPH1Q14D04 833 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 KLC2Q9H0B6 622 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 SP110Q9HB58 689 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 TMEM247A6NEH6 219 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 SPATA2LQ8IUW3 424 aaPredicted RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 RBM41Q96IZ5 413 aaKnown RBP10.41□□□□□ -0.74
COL4A6-202ENST00000372216 HEMGNQ9BXL5 484 aa10.41□□□□□ -0.74
COL4A6-202ENST00000372216 SDC4P31431 198 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 POU5F1BQ06416 359 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 FAM133BQ5BKY9 247 aaKnown RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 ANKRD40Q6AI12 368 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 RAPGEF5Q92565 580 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 FARP1Q9Y4F1 1045 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 EMSYQ7Z589 1322 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 PDHBP11177 359 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 RALAP11233 206 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 GTF2A2P52657 109 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 EXOSC10Q01780 885 aaKnown RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 DHX9Q08211 1270 aaKnown RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 DRAP1Q14919 205 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 DUOXA2Q1HG44 320 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 ZKSCAN4Q969J2 545 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 PGBD4Q96DM1 585 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 PHF20Q9BVI0 1012 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 RNF14Q9UBS8 474 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 CAPN7Q9Y6W3 813 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 FGGP02679 453 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 CHGBP05060 677 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 GYS1P13807 737 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 XKR3Q5GH77 459 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 MAP3K21Q5TCX8 1036 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 SCYL3Q8IZE3 742 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 DHX38Q92620 1227 aaKnown RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 NUDT12Q9BQG2 462 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 STAP1Q9ULZ2 295 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 UBE2Q2LH0YL09 131 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 TADA2AO75478 443 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 PYGLP06737 847 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 NR3C2P08235 984 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 TRIM49P0CI25 452 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 TRIM49CP0CI26 452 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 SOX11P35716 441 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 CDC42EP1Q00587 391 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 BTBD8Q5XKL5 378 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 TRIM42Q8IWZ5 723 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 AGR3Q8TD06 166 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 EPB41L4AQ9HCS5 686 aaPredicted RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 PCSK1NQ9UHG2 260 aa10.4□□□□□ -0.74
COL4A6-202ENST00000372216 DIS3Q9Y2L1 958 aaKnown RBP10.4□□□□□ -0.74
COL4A6-202ENST00000372216 CCDC78A2IDD5 438 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 SLC7A5Q01650 507 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 IER5Q5VY09 327 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 CENPUQ71F23 418 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 FMR1NBQ8N0W7 255 aaPredicted RBP10.4□□□□□ -0.75
COL4A6-202ENST00000372216 CHST13Q8NET6 341 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 B4GALNT2Q8NHY0 566 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 SEPT1Q8WYJ6 367 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 AGBL1Q96MI9 1066 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 SH2D3AQ9BRG2 576 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 TIPINQ9BVW5 301 aa10.4□□□□□ -0.75
COL4A6-202ENST00000372216 INTS9Q9NV88 658 aaKnown RBP10.4□□□□□ -0.75
COL4A6-202ENST00000372216 ZNF500O60304 480 aaPredicted RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 RPSAP08865 295 aaKnown RBP10.39□□□□□ -0.75
COL4A6-202ENST00000372216 PDIA6Q15084 440 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 RASSF3Q86WH2 238 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 TTC39CQ8N584 583 aa10.39□□□□□ -0.75
COL4A6-202ENST00000372216 ZNF564Q8TBZ8 553 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms