RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 E5RI56 91 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 AP2B1P63010 937 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 NAALADL2Q58DX5 795 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 RHOT1Q8IXI2 618 aa25.37■■□□□ 1.65
RAPGEF1-203ENST00000372195 SMARCA1P28370 1054 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 HOXA7P31268 230 aaPredicted RBP25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 CCZ1BP86790 482 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 CCZ1P86791 482 aaPredicted RBP25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 SPATA33Q96N06 139 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 KIAA1586Q9HCI6 787 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 LAMC1P11047 1609 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 SOX11P35716 441 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 MTM1Q13496 603 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 LRRC8EQ6NSJ5 796 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 A0A0G2JLW4 131 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 SPP2Q13103 211 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 E4F1Q66K89 784 aaPredicted RBP25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 RTKN2Q8IZC4 609 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 KIF17Q9P2E2 1029 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 SUFUQ9UMX1 484 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 RNF103-CHMP3A0A140T963 221 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 KDSRQ06136 332 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 RFWD2Q8NHY2 731 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 KLC4Q9NSK0 619 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 TRIM33Q9UPN9 1127 aa25.36■■□□□ 1.65
RAPGEF1-203ENST00000372195 RPS6KA4O75676 772 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 RXRBP28702 533 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 BCAR1P56945 870 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 WDR19Q8NEZ3 1342 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 A8MXQ7 604 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 NSUN6Q8TEA1 469 aaKnown RBP25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 DTX3LQ8TDB6 740 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 DAB2P98082 770 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 CATSPER3Q86XQ3 398 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 AGO2Q9UKV8 859 aaKnown RBP25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 ATP5HO75947 161 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 TBXAS1P24557 533 aaPredicted RBP25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 LRRC36Q1X8D7 754 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 TAS2R42Q7RTR8 314 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 COG1Q8WTW3 980 aa25.35■■□□□ 1.65
RAPGEF1-203ENST00000372195 KCNN4O15554 427 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 CHN1P15882 459 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 RFFLQ8WZ73 363 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 EGFL8Q99944 293 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 NEMP1O14524 444 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 PPP1R18Q6NYC8 613 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 KIF12Q96FN5 646 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 FAM84BQ96KN1 310 aaPredicted RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 SP110Q9HB58 689 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 PARVAQ9NVD7 372 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 CYP19A1P11511 503 aaPredicted RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 RANBP1P43487 201 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 SCG3Q8WXD2 468 aaKnown RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 MYBP10242 640 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 YWHABP31946 246 aaKnown RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 EIF3EP60228 445 aaKnown RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 KRT76Q01546 638 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 AGAP3Q96P47 875 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 CHORDC1Q9UHD1 332 aaPredicted RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 SCP2P22307 547 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 P3H1Q32P28 736 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 MRPL4Q9BYD3 311 aaKnown RBP25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 SLC8A2Q9UPR5 921 aa25.34■■□□□ 1.65
RAPGEF1-203ENST00000372195 PHF20L1A8MW92 1017 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 HSPA9P38646 679 aaKnown RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 NR1H3Q13133 447 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 GUF1Q8N442 669 aaKnown RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 NPHS2Q9NP85 383 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 FAM187AA6NFU0 413 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ATG9AQ7Z3C6 839 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ARHGEF1Q92888 912 aaKnown RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 SENP2Q9HC62 589 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 HOXC10Q9NYD6 342 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 TYK2P29597 1187 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 HPCAL4Q9UM19 191 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ZNF609O15014 1411 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 APOL1O14791 398 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ATMINO43313 823 aaPredicted RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 PPARGP37231 505 aaPredicted RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ACOT2P49753 483 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 SESN2P58004 480 aaPredicted RBP25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 PSMC5P62195 406 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 ULK4Q96C45 1275 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 CLMNQ96JQ2 1002 aa25.33■■□□□ 1.65
RAPGEF1-203ENST00000372195 CLEC4GQ6UXB4 293 aa25.33■■□□□ 1.64
RAPGEF1-203ENST00000372195 HAUS6Q7Z4H7 955 aa25.33■■□□□ 1.64
RAPGEF1-203ENST00000372195 OR6P1Q8NGX9 317 aa25.33■■□□□ 1.64
RAPGEF1-203ENST00000372195 PDLIM2Q96JY6 352 aa25.33■■□□□ 1.64
RAPGEF1-203ENST00000372195 NRKQ7Z2Y5 1582 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 RGS7P49802 495 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 TSPY1Q01534 308 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 MMP19Q99542 508 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 DDX56Q9NY93 547 aaKnown RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 ICA1LQ8NDH6 482 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 SNX12Q9UMY4 172 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 EXOSC10Q01780 885 aaKnown RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 ACCSLQ4AC99 568 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 BCORL1Q5H9F3 1711 aa25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 TOPORSQ9NS56 1045 aaPredicted RBP25.32■■□□□ 1.64
RAPGEF1-203ENST00000372195 NDFIP2Q9NV92 336 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms