RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 ACTN3Q08043 901 aaPredicted RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 EPC2Q52LR7 807 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 C1QTNF12Q5T7M4 302 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 AP1ARQ63HQ0 302 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 MICAL1Q8TDZ2 1067 aa18.37■□□□□ 0.53
VEGFA-205ENST00000372067 NOC2LQ9Y3T9 749 aaKnown RBP18.37■□□□□ 0.53
VEGFA-205ENST00000372067 GOLGA6L10A0A0M3HER8 536 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 GLI1P08151 1106 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 DSG3P32926 999 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 TBC1D25Q3MII6 688 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 NIPA1Q7RTP0 329 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 ZC3H3Q8IXZ2 948 aaKnown RBP18.36■□□□□ 0.53
VEGFA-205ENST00000372067 OTUD5Q96G74 571 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 PBKQ96KB5 322 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 OPA1O60313 960 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 COPB2P35606 906 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-205ENST00000372067 WDR44Q5JSH3 913 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 ANO5Q75V66 913 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 VSIG10LQ86VR7 867 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 DDX42Q86XP3 938 aaKnown RBP eCLIP18.36■□□□□ 0.534e-7■■■□□ 17.6
VEGFA-205ENST00000372067 ATP6V0A4Q9HBG4 840 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 RAD51CO43502 376 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 ACOT2P49753 483 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 STXBP2Q15833 593 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 ODF2Q5BJF6 829 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 UBLCP1Q8WVY7 318 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-205ENST00000372067 FIZ1Q96SL8 496 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 PCDHGC5Q9Y5F6 944 aa18.36■□□□□ 0.53
VEGFA-205ENST00000372067 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
VEGFA-205ENST00000372067 SIPA1L1O43166 1804 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 COL4A5P29400 1685 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 SGPL1O95470 568 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 CALCAP01258 141 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ADRB2P07550 413 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 MSL3Q8N5Y2 521 aaKnown RBP18.35■□□□□ 0.53
VEGFA-205ENST00000372067 RFFLQ8WZ73 363 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 DCPSQ96C86 337 aaKnown RBP18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF653Q96CK0 615 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 CDHR1Q96JP9 859 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ANKEF1Q9NU02 776 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 FDX1P10109 184 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 PDE6CP51160 858 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 PALB2Q86YC2 1186 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 NLGN2Q8NFZ4 835 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 SLC30A5Q8TAD4 765 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 SLC7A3Q8WY07 619 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 KIFAP3Q92845 792 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ARHGEF26Q96DR7 871 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 TMEM117Q9H0C3 514 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 AMACRQ9UHK6 382 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ARFGEF1Q9Y6D6 1849 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 PRKCIP41743 596 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 KRT39Q6A163 491 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 USP38Q8NB14 1042 aa18.35■□□□□ 0.53
VEGFA-205ENST00000372067 ZBED3Q96IU2 234 aaPredicted RBP18.35■□□□□ 0.53
VEGFA-205ENST00000372067 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
VEGFA-205ENST00000372067 CHUKO15111 745 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 CCDC60Q8IWA6 550 aaPredicted RBP18.34■□□□□ 0.53
VEGFA-205ENST00000372067 MCPH1Q8NEM0 835 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 DHX38Q92620 1227 aaKnown RBP18.34■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF408Q9H9D4 720 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 ELP3Q9H9T3 547 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 C1orf112Q9NSG2 853 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
VEGFA-205ENST00000372067 SEZ6Q53EL9 994 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 ZBTB33Q86T24 672 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 GPRASP2Q96D09 838 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 FAM107BQ9H098 131 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
VEGFA-205ENST00000372067 K7ERI5 159 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 ATP1A2P50993 1020 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 DMAC2Q9NW81 257 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 RPTORQ8N122 1335 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 ZNF233A6NK53 670 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 SHOX2O60902 331 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-205ENST00000372067 DDNO94850 711 aaPredicted RBP18.33■□□□□ 0.53
VEGFA-205ENST00000372067 ITGA4P13612 1032 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 IFFO1Q0D2I5 559 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 TRADDQ15628 312 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 TAS1R2Q8TE23 839 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 BSNDQ8WZ55 320 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 ZBTB10Q96DT7 871 aa18.33■□□□□ 0.53
VEGFA-205ENST00000372067 ZEB2O60315 1214 aa18.33■□□□□ 0.52
VEGFA-205ENST00000372067 PIK3CAP42336 1068 aa18.33■□□□□ 0.52
VEGFA-205ENST00000372067 UBL4BQ8N7F7 174 aa18.33■□□□□ 0.52
VEGFA-205ENST00000372067 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.33■□□□□ 0.521e-12■■□□□ 14.1
VEGFA-205ENST00000372067 AZI2Q9H6S1 392 aa18.33■□□□□ 0.52
VEGFA-205ENST00000372067 SART1O43290 800 aaKnown RBP18.32■□□□□ 0.52
VEGFA-205ENST00000372067 ZNF862O60290 1169 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 COQ9O75208 318 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 DGAT1O75907 488 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SRGAP2CP0DJJ0 459 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 JAM2P57087 298 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 FAM210AQ96ND0 272 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 SH3GL3Q99963 347 aa18.32■□□□□ 0.52
VEGFA-205ENST00000372067 CELF4Q9BZC1 486 aaKnown RBP18.32■□□□□ 0.52
VEGFA-205ENST00000372067 CYP26B1Q9NR63 512 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms