RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 PDE11AQ9HCR9 933 aa15.67■□□□□ 0.1
NDC1-201ENST00000371429 PPP1R9AQ9ULJ8 1098 aa15.67■□□□□ 0.1
NDC1-201ENST00000371429 FIS1Q9Y3D6 152 aa15.67■□□□□ 0.1
NDC1-201ENST00000371429 GOLGA8QA0A0J9YX86 632 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 GOLGA8OA6NCC3 632 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 GOLGA8NF8WBI6 632 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 PRRG1O14668 218 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 RASGRF2O14827 1237 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 OR1G1P47890 313 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 TADA2BQ86TJ2 420 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 TAF6LQ9Y6J9 622 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 C17orf102A2RUQ5 167 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 H3BRJ5 948 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 RGL2O15211 777 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 VCAM1P19320 739 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 ARID5BQ14865 1188 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 MAGEB5Q9BZ81 275 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 STK38LQ9Y2H1 464 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 CYBBP04839 570 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 PDGFRBP09619 1106 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 CA4P22748 312 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 SLC7A5Q01650 507 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 RHOT1Q8IXI2 618 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 BCAS4Q8TDM0 211 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 TRPC7Q9HCX4 862 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 PARVAQ9NVD7 372 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 IGSF9BQ9UPX0 1349 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 TXNDC9O14530 226 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 NOTUMQ6P988 496 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 C18orf8Q96DM3 657 aa15.66■□□□□ 0.1
NDC1-201ENST00000371429 COL5A2P05997 1499 aaPredicted RBP15.66■□□□□ 0.1
NDC1-201ENST00000371429 A0A1W2PQC6 194 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 C3orf67Q6ZVT6 689 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 RSRC1Q96IZ7 334 aaKnown RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 DDX50Q9BQ39 737 aaKnown RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 EDEM3Q9BZQ6 932 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 TOM1L1O75674 476 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 IL18RAPO95256 599 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 THPOP40225 353 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ZC2HC1CQ53FD0 456 aaPredicted RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 TAF1BQ53T94 588 aaPredicted RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 KCTD17Q8N5Z5 321 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 WHAMMQ8TF30 809 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 MMTAG2Q9BU76 263 aaKnown RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 SAYSD1Q9NPB0 183 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 SNX24Q9Y343 169 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 DCDC2CA8MYV0 355 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 MYBP10242 640 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 CDH6P55285 790 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 TAP1Q03518 808 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 STK4Q13043 487 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 DBN1Q16643 649 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 LSM7Q9UK45 103 aaKnown RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 IQANK1A0A1B0GTG1 560 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 KRT37O76014 449 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 RHOBTB3O94955 611 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ACSL3O95573 720 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ALDH1A1P00352 501 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 CASP2P42575 452 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ZKSCAN8Q15776 578 aaPredicted RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 ADSSL1Q8N142 457 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 GPC2Q8N158 579 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ARRDC4Q8NCT1 418 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 ZNF512Q96ME7 567 aaPredicted RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 TARS2Q9BW92 718 aaKnown RBP15.65■□□□□ 0.1
NDC1-201ENST00000371429 ZDHHC9Q9Y397 364 aa15.65■□□□□ 0.1
NDC1-201ENST00000371429 PCSK1P29120 753 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 HSD17B4P51659 736 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 TSNAXIP1Q2TAA8 658 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 RNF10Q8N5U6 811 aaKnown RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 EXT2Q93063 718 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 AKT1S1Q96B36 256 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 AGPAT1Q99943 283 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 MSH4O15457 936 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 FXR2P51116 673 aaKnown RBP eCLIP15.64■□□□□ 0.09
NDC1-201ENST00000371429 GABPB1Q06547 395 aaPredicted RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 AP1B1Q10567 949 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 ZNF211Q13398 564 aaPredicted RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 GPATCH11Q8N954 259 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 EPAS1Q99814 870 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 PPP1R12CQ9BZL4 782 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 DYRK4Q9NR20 520 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 SUN1O94901 812 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 CUL1Q13616 776 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 ZNF235Q14590 738 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 ITPRIPL1Q6GPH6 555 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 USP49Q70CQ1 688 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 DCP1BQ8IZD4 617 aaKnown RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 GMCL1Q96IK5 515 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 DDX56Q9NY93 547 aaKnown RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 GAS2O43903 313 aaKnown RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 FMO5P49326 533 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 RGS7P49802 495 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 PDXDC1Q6P996 788 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 SEPT5Q99719 369 aaPredicted RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 GLIS2Q9BZE0 524 aaPredicted RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 FAM8A1Q9UBU6 413 aa15.64■□□□□ 0.09
NDC1-201ENST00000371429 PRG3Q9Y2Y8 225 aaPredicted RBP15.64■□□□□ 0.09
NDC1-201ENST00000371429 FDPSP14324 419 aaKnown RBP15.63■□□□□ 0.09
NDC1-201ENST00000371429 DDR1Q08345 913 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms