RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 RCAN1P53805 252 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 PDXDC1Q6P996 788 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 KIFC3Q9BVG8 833 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 APOBEC3FQ8IUX4 373 aaKnown RBP23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 GUF1Q8N442 669 aaKnown RBP23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 HPS3Q969F9 1004 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 CCDC90BQ9GZT6 254 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 KRT17Q04695 432 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 ANKRD40Q6AI12 368 aa23.47■■□□□ 1.35
TM9SF3-201ENST00000371142 FGFR4P22455 802 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 ARSEP51690 589 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 HAUS6Q7Z4H7 955 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 ANKMY2Q8IV38 441 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 CASS4Q9NQ75 786 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 SLC26A7Q8TE54 656 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 SFMBT1Q9UHJ3 866 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 AXIN2Q9Y2T1 843 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 APOL1O14791 398 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 OSBPL5Q9H0X9 879 aaPredicted RBP23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 COG4Q9H9E3 785 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 RNF103-CHMP3A0A140T963 221 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 ASAP2O43150 1006 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 YWHABP31946 246 aaKnown RBP23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 PTK2BQ14289 1009 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 BTBD8Q5XKL5 378 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 TSPOAP1O95153 1857 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 ATP11CQ8NB49 1132 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 AGPAT1Q99943 283 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 BFARQ9NZS9 450 aa23.46■■□□□ 1.35
TM9SF3-201ENST00000371142 ATP2C1P98194 919 aaPredicted RBP23.45■■□□□ 1.35
TM9SF3-201ENST00000371142 ZC3H15Q8WU90 426 aaKnown RBP23.45■■□□□ 1.35
TM9SF3-201ENST00000371142 SH3KBP1Q96B97 665 aa23.45■■□□□ 1.35
TM9SF3-201ENST00000371142 ARL8AQ96BM9 186 aa23.45■■□□□ 1.35
TM9SF3-201ENST00000371142 ALG13Q9NP73 1137 aaKnown RBP23.45■■□□□ 1.35
TM9SF3-201ENST00000371142 ALX1Q15699 326 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 NLRP14Q86W24 1093 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 PPP1R36Q96LQ0 422 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 RGL1Q9NZL6 768 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 SPATA31A3Q5VYP0 1347 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 TYK2P29597 1187 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 AARSP49588 968 aaKnown RBP eCLIP23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 DUOXA2Q1HG44 320 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 PIDD1Q9HB75 910 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 FBXL5Q9UKA1 691 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 FAM187AA6NFU0 413 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 DNAJC6O75061 913 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 PID1Q7Z2X4 250 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 LDHDQ86WU2 507 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 RMDN1Q96DB5 314 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 USP11P51784 963 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 TERF2Q15554 542 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 TRIM72Q6ZMU5 477 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 RNF149Q8NC42 400 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 RFFLQ8WZ73 363 aa23.45■■□□□ 1.34
TM9SF3-201ENST00000371142 CFAP69A5D8W1 941 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 TADA2BQ86TJ2 420 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 SRBD1Q8N5C6 995 aaKnown RBP23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 VCPP55072 806 aaKnown RBP23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 SCARF1Q14162 830 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 RNF181Q9P0P0 153 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 ZNF212Q9UDV6 495 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 SNX5Q9Y5X3 404 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 EIF4E1BA6NMX2 242 aaKnown RBP23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 ENOSF1Q7L5Y1 443 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 FAM84BQ96KN1 310 aaPredicted RBP23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 PBXIP1Q96AQ6 731 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 PCDHA10Q9Y5I2 948 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 MBD5Q9P267 1494 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 FOXO4P98177 505 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 TMED8Q6PL24 325 aaPredicted RBP23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 AMACRQ9UHK6 382 aa23.44■■□□□ 1.34
TM9SF3-201ENST00000371142 SHROOM2Q13796 1616 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 MTF1Q14872 753 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 NR1H4Q96RI1 486 aaPredicted RBP23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 TSC22D3Q99576 134 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 FRMD5Q7Z6J6 570 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 SH2D3AQ9BRG2 576 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 MRPL40Q9NQ50 206 aaKnown RBP23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 EIF3EP60228 445 aaKnown RBP23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 ZNF235Q14590 738 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 ATP6V1G3Q96LB4 118 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 SULT1E1P49888 294 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 TTC23LQ6PF05 361 aa23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.43■■□□□ 1.34
TM9SF3-201ENST00000371142 NAA30Q147X3 362 aaPredicted RBP23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 KCNA2P16389 499 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 AP2B1P63010 937 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 FLOT2Q14254 428 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 EPHA7Q15375 998 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 ZC3H12BQ5HYM0 836 aaKnown RBP23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 THEMIS2Q5TEJ8 643 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 EYA4O95677 639 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 HMGCS2P54868 508 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 ADAM33Q9BZ11 813 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 LIMA1Q9UHB6 759 aaKnown RBP23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 PRPF4O43172 522 aaKnown RBP eCLIP23.42■■□□□ 1.343e-24■□□□□ 9
TM9SF3-201ENST00000371142 GRIK1P39086 918 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 ZNF507Q8TCN5 953 aa23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 JPH1Q9HDC5 661 aaPredicted RBP23.42■■□□□ 1.34
TM9SF3-201ENST00000371142 FARP1Q9Y4F1 1045 aaPredicted RBP23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms