RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 TEX28O15482 410 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 EDIL3O43854 480 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 N4BP1O75113 896 aaKnown RBP16.77■□□□□ 0.28
RPF1-202ENST00000370656 CYP3A7P24462 503 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 OR1G1P47890 313 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 B3GNT9Q6UX72 402 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 FAM177A1Q8N128 213 aaPredicted RBP16.77■□□□□ 0.28
RPF1-202ENST00000370656 SLC44A3Q8N4M1 653 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 C8orf76Q96K31 380 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 HINFPQ9BQA5 517 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 PLEKHA4Q9H4M7 779 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 TBC1D17Q9HA65 648 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.77■□□□□ 0.28
RPF1-202ENST00000370656 CA14Q9ULX7 337 aa16.77■□□□□ 0.28
RPF1-202ENST00000370656 PRG3Q9Y2Y8 225 aaPredicted RBP16.77■□□□□ 0.28
RPF1-202ENST00000370656 FANCMQ8IYD8 2048 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 KRBA1A5PL33 1030 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 H3BQV1 296 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 TDP2O95551 362 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 C1RP00736 705 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 SRGAP2CP0DJJ0 459 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 ITGA4P13612 1032 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 NCLP19338 710 aaKnown RBP16.76■□□□□ 0.27
RPF1-202ENST00000370656 RFC5P40937 340 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 QARSP47897 775 aaKnown RBP16.76■□□□□ 0.27
RPF1-202ENST00000370656 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
RPF1-202ENST00000370656 PLA2G4FQ68DD2 849 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 ATL3Q6DD88 541 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 MOXD1Q6UVY6 613 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 DGLUCYQ7Z3D6 616 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 PRPF31Q8WWY3 499 aaKnown RBP16.76■□□□□ 0.27
RPF1-202ENST00000370656 RSAD2Q8WXG1 361 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 RMDN1Q96DB5 314 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 CEP170P1Q96L14 293 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 PCDHA4Q9UN74 947 aa16.76■□□□□ 0.27
RPF1-202ENST00000370656 GOLGA6L22H0YM25 854 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 ASAP2O43150 1006 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 GAS2O43903 313 aaKnown RBP16.75■□□□□ 0.27
RPF1-202ENST00000370656 ERLIN2O94905 339 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 AFF1P51825 1210 aaKnown RBP16.75■□□□□ 0.27
RPF1-202ENST00000370656 PCBP1Q15365 356 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPF1-202ENST00000370656 SPECC1Q5M775 1068 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 KIAA0319Q5VV43 1072 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 ETNPPLQ8TBG4 499 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 TCP11Q8WWU5 503 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 RXFP1Q9HBX9 757 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
RPF1-202ENST00000370656 LMBRD1Q9NUN5 540 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 ZDHHC7Q9NXF8 308 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 DDX25Q9UHL0 483 aaKnown RBP16.75■□□□□ 0.27
RPF1-202ENST00000370656 SIT1Q9Y3P8 196 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 R4GN57 208 aa16.75■□□□□ 0.27
RPF1-202ENST00000370656 MIA3Q5JRA6 1907 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 MYH15Q9Y2K3 1946 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 RFPL2O75678 378 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 LAMP2P13473 410 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 U2AF2P26368 475 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPF1-202ENST00000370656 AXLP30530 894 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 HOXA11P31270 313 aaPredicted RBP16.74■□□□□ 0.27
RPF1-202ENST00000370656 DSG1Q02413 1049 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 LAMTOR4Q0VGL1 99 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 UBXN11Q5T124 520 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 COLGALT2Q8IYK4 626 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 KIAA2013Q8IYS2 634 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 HACE1Q8IYU2 909 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 BLIDQ8IZY5 108 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 GPR152Q8TDT2 470 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 RIN2Q8WYP3 895 aaPredicted RBP16.74■□□□□ 0.27
RPF1-202ENST00000370656 TMEM143Q96AN5 459 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 CCDC51Q96ER9 411 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 SHDQ96IW2 340 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 MBOAT7Q96N66 472 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 MYADMQ96S97 322 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 COLEC11Q9BWP8 271 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 DHX33Q9H6R0 707 aaKnown RBP16.74■□□□□ 0.27
RPF1-202ENST00000370656 ARHGEF3Q9NR81 526 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 MARCH5Q9NX47 278 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 ZFP37Q9Y6Q3 630 aaPredicted RBP16.74■□□□□ 0.27
RPF1-202ENST00000370656 CACNA1BQ00975 2339 aa16.74■□□□□ 0.27
RPF1-202ENST00000370656 OTOGLQ3ZCN5 2332 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 CEP250Q9BV73 2442 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 P4HBP07237 508 aaKnown RBP16.73■□□□□ 0.27
RPF1-202ENST00000370656 NPEPPSP55786 919 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 CREMQ03060 361 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 PPP2R5CQ13362 524 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 PUM1Q14671 1186 aaKnown RBP eCLIP16.73■□□□□ 0.27
RPF1-202ENST00000370656 FOXD4L5Q5VV16 416 aaPredicted RBP16.73■□□□□ 0.27
RPF1-202ENST00000370656 GALNT17Q6IS24 598 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 NOTUMQ6P988 496 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 DCLRE1AQ6PJP8 1040 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 OTUD6AQ7L8S5 288 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 TAS1R1Q7RTX1 841 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 BRAPQ7Z569 592 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 PALB2Q86YC2 1186 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 C1orf210Q8IVY1 113 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 GPR65Q8IYL9 337 aa16.73■□□□□ 0.27
RPF1-202ENST00000370656 RNF168Q8IYW5 571 aaPredicted RBP16.73■□□□□ 0.27
RPF1-202ENST00000370656 RNF149Q8NC42 400 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms