RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 SIK1P57059 783 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 KDSRQ06136 332 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 DUPD1Q68J44 220 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 DPH6Q7L8W6 267 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC25A41Q8N5S1 370 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC5A5Q92911 643 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 PGM2Q96G03 612 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 SHCBP1LQ9BZQ2 653 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 TISP43B9A030 160 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 CD58P19256 250 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 NOP14P78316 857 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM182BQ5T319 152 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 TTC27Q6P3X3 843 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 CCDC124Q96CT7 223 aaKnown RBP11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 BICD1Q96G01 975 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 AGPAT1Q99943 283 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 TBC1D10AQ9BXI6 508 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 CARD9Q9H257 536 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 ETAA1Q9NY74 926 aa11.12□□□□□ -0.63
PRPF38B-201ENST00000370021 ARHGEF35A5YM69 484 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 FMO5P49326 533 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 DEUP1Q05D60 604 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SPARCL1Q14515 664 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ECHDC2Q86YB7 292 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ANO3Q9BYT9 981 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 TRABDQ9H4I3 376 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 STOML1Q9UBI4 398 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 EMSYQ7Z589 1322 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CCDC195A0A1B0GUA6 201 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 KIF3CO14782 793 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 MAP3K7O43318 606 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ATP9AO75110 1047 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 RARGP13631 454 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 MTMR2Q13614 643 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 PDIA5Q14554 519 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 IZUMO3Q5VZ72 239 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 TLDC1Q6P9B6 456 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CRELD2Q6UXH1 353 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 PPP1R21Q6ZMI0 780 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 STXBP4Q6ZWJ1 553 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 MIGA2Q7L4E1 593 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 PIGWQ7Z7B1 504 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ZBED8Q8IZ13 594 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CYP4X1Q8N118 509 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 TLCD1Q96CP7 247 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 RBM15Q96T37 977 aaKnown RBP eCLIP11.11□□□□□ -0.633e-7■■■□□ 18.4
PRPF38B-201ENST00000370021 CHST7Q9NS84 486 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 BSDC1Q9NW68 430 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SPEF2Q9C093 1822 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 TNS3Q68CZ2 1445 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 C5orf60A6NFR6 353 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ERVV-1B6SEH8 477 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ATP2A1O14983 1001 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF268Q14587 947 aaPredicted RBP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CBWD6Q4V339 395 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CBWD3Q5JTY5 395 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 CBWD5Q5RIA9 395 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 FRMD5Q7Z6J6 570 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC35C1Q96A29 364 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC5A4Q9NY91 659 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC12A4Q9UP95 1085 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 AFF2P51816 1311 aa11.11□□□□□ -0.63
PRPF38B-201ENST00000370021 C2orf71A6NGG8 1288 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 SMNDC1O75940 238 aaKnown RBP eCLIP11.1□□□□□ -0.633e-7■■□□□ 13.7
PRPF38B-201ENST00000370021 SGPL1O95470 568 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 CALB2P22676 271 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 KLRC3Q07444 240 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 THOC5Q13769 683 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 DCAF12L1Q5VU92 463 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 LLGL2Q6P1M3 1020 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 TPTE2Q6XPS3 522 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 SLC13A5Q86YT5 568 aaPredicted RBP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 ATP8B4Q8TF62 1192 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 EBF2Q9HAK2 575 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 ARMCX1Q9P291 453 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 COG5Q9UP83 839 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 STRCP1A6NGW2 1772 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 TMEM94Q12767 1356 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 ECM29Q5VYK3 1845 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 RBAK-RBAKDNI3L0D1 243 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 TMEM253P0C7T8 217 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 FXR2P51116 673 aaKnown RBP eCLIP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 EPHB1P54762 984 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 SNX30Q5VWJ9 437 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 LMBRD2Q68DH5 695 aaPredicted RBP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 CEP128Q6ZU80 1094 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 ZNF804AQ7Z570 1209 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 CCNJLQ8IV13 435 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 B4GALNT2Q8NHY0 566 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 TYW1Q9NV66 732 aaKnown RBP11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 RPTORQ8N122 1335 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 PITPNM2Q9BZ72 1349 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 MYH7BA7E2Y1 1941 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 A0A1B0GVG6 124 aa11.1□□□□□ -0.63
PRPF38B-201ENST00000370021 FAM47DPA6NHR8 397 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms