RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 CXorf38Q8TB03 319 aa13.17□□□□□ -0.3
RAP1A-202ENST00000369709 RTCBQ9Y3I0 505 aaKnown RBP13.17□□□□□ -0.3
RAP1A-202ENST00000369709 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 P3H1Q32P28 736 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 BSPRYQ5W0U4 402 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 TRAPPC9Q96Q05 1148 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 BHMT2Q9H2M3 363 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 RIMS1Q86UR5 1692 aaKnown RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 HEG1Q9ULI3 1381 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 KRT1P04264 644 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 LINGO3P0C6S8 592 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 HARSP12081 509 aaKnown RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 GPS1Q13098 491 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 ZNF268Q14587 947 aaPredicted RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 CENPPQ6IPU0 288 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 ARL10Q8N8L6 244 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 L3MBTL3Q96JM7 780 aaPredicted RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 KLHL11Q9NVR0 708 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 TSC22D4Q9Y3Q8 395 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 ATXN3P54252 364 aaPredicted RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 HIC1Q14526 733 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 CNKSR1Q969H4 720 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 WNT8AQ9H1J5 351 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 PIDD1Q9HB75 910 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 NKX1-2Q9UD57 310 aaPredicted RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 HNRNPCL1O60812 293 aaKnown RBP13.16□□□□□ -0.3
RAP1A-202ENST00000369709 MECOMQ03112 1051 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 BTNL9Q6UXG8 535 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 GLIS3Q8NEA6 775 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 NKX2-3Q8TAU0 364 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 GALNT8Q9NY28 637 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 NAALADL1Q9UQQ1 740 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 MAD1L1Q9Y6D9 718 aa13.16□□□□□ -0.3
RAP1A-202ENST00000369709 PDE5AO76074 875 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 ITIH2P19823 946 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 NOP14P78316 857 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 CAV1Q03135 178 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 TROAPQ12815 778 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 CRLF3Q8IUI8 442 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 ZMAT2Q96NC0 199 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 SHCBP1LQ9BZQ2 653 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 A2ML1A8K2U0 1454 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 ZC3H4Q9UPT8 1303 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 C6orf229H3BNL8 230 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 COPEO14579 308 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 CYP27B1O15528 508 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 KLRC4O43908 158 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 BNIP1Q12981 228 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 SYCP2LQ5T4T6 812 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 EXOC3L1Q86VI1 746 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 FAM13CQ8NE31 585 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 BAP1Q92560 729 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 RBM41Q96IZ5 413 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 EPAS1Q99814 870 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 AGPAT1Q99943 283 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 SLC13A1Q9BZW2 595 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 RMI1Q9H9A7 625 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 XAB2Q9HCS7 855 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 NDC80O14777 642 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 GH1P01241 217 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 HLA-DOAP06340 250 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 GCLMP48507 274 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 ESRRGP62508 458 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 LMNB2Q03252 620 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 Q4G0T1 1027 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 ANO5Q75V66 913 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 NLRP7Q8WX94 980 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 PPWD1Q96BP3 646 aaKnown RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 TMEM47Q9BQJ4 181 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 BRIP1Q9BX63 1249 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.15□□□□□ -0.3
RAP1A-202ENST00000369709 SCINQ9Y6U3 715 aa13.15□□□□□ -0.3
RAP1A-202ENST00000369709 GOLGA8IPA6NC78 632 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 C5orf60A6NFR6 353 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 GOLGA8JA6NMD2 632 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 MFAP3P55082 362 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 GRB10Q13322 594 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 CNGA3Q16281 694 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 SLF2Q8IX21 1173 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 SLFN12Q8IYM2 578 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 GALNT15Q8N3T1 639 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 SLC30A5Q8TAD4 765 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 CNBD2Q96M20 576 aa13.15□□□□□ -0.31
RAP1A-202ENST00000369709 ZNF184Q99676 751 aaPredicted RBP13.15□□□□□ -0.31
RAP1A-202ENST00000369709 SMG5Q9UPR3 1016 aaKnown RBP13.15□□□□□ -0.31
RAP1A-202ENST00000369709 GGPS1O95749 300 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 PON1P27169 355 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 MTFR1Q15390 333 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 NAALADL2Q58DX5 795 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 NT5DC3Q86UY8 548 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 EHMT1Q9H9B1 1298 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 DMAP1Q9NPF5 467 aaPredicted RBP13.14□□□□□ -0.31
RAP1A-202ENST00000369709 AIPL1Q9NZN9 384 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 CNOT7Q9UIV1 285 aaKnown RBP13.14□□□□□ -0.31
RAP1A-202ENST00000369709 SMIM22K7EJ46 135 aa13.14□□□□□ -0.31
RAP1A-202ENST00000369709 NOP56O00567 594 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms