RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 TRAK2O60296 914 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 ZC3H11AO75152 810 aaKnown RBP eCLIP20.32■□□□□ 0.84
CHTOP-202ENST00000368687 NR1I2O75469 434 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 TOM1L1O75674 476 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 LONRF3Q496Y0 759 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 NT5DC1Q5TFE4 455 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 SHC4Q6S5L8 630 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 HAUS6Q7Z4H7 955 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 SPPL3Q8TCT6 385 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 DDX12PQ92771 950 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 RPS6KC1Q96S38 1066 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 ST6GALNAC4Q9H4F1 302 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 ZHX3Q9H4I2 956 aa20.32■□□□□ 0.84
CHTOP-202ENST00000368687 TOPORSQ9NS56 1045 aaPredicted RBP20.32■□□□□ 0.84
CHTOP-202ENST00000368687 MEIS3P2A8K0S8 358 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 K7ENM7 598 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 MCF2P10911 925 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 MLH1P40692 756 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 BCAR1P56945 870 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 GRIK3Q13003 919 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 SKIV2LQ15477 1246 aaKnown RBP20.31■□□□□ 0.84
CHTOP-202ENST00000368687 AAK1Q2M2I8 961 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 ZNF568Q3ZCX4 644 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 RESP18Q5W5W9 173 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 MPZL3Q6UWV2 235 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 PDILTQ8N807 584 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 LEO1Q8WVC0 666 aaPredicted RBP20.31■□□□□ 0.84
CHTOP-202ENST00000368687 POF1BQ8WVV4 589 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 MRPS27Q92552 414 aaKnown RBP20.31■□□□□ 0.84
CHTOP-202ENST00000368687 HVCN1Q96D96 273 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 TMEM169Q96HH4 297 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 GAD1Q99259 594 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 APOL6Q9BWW8 343 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 ALG13Q9NP73 1137 aaKnown RBP20.31■□□□□ 0.84
CHTOP-202ENST00000368687 TLR9Q9NR96 1032 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 THEGQ9P2T0 379 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 PARP2Q9UGN5 583 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 HES2Q9Y543 173 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 TTC28Q96AY4 2481 aa20.31■□□□□ 0.84
CHTOP-202ENST00000368687 CACNB1Q02641 598 aaPredicted RBP20.3■□□□□ 0.84
CHTOP-202ENST00000368687 ALCAMQ13740 583 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 KYAT1Q16773 422 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 ADALQ6DHV7 355 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 TAS1R3Q7RTX0 852 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 CDR2LQ86X02 465 aaPredicted RBP20.3■□□□□ 0.84
CHTOP-202ENST00000368687 SLC39A11Q8N1S5 342 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 BICD1Q96G01 975 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 TCHPQ9BT92 498 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 CCDC94Q9BW85 323 aaPredicted RBP20.3■□□□□ 0.84
CHTOP-202ENST00000368687 NRDE2Q9H7Z3 1164 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 PTPRHQ9HD43 1115 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 KBTBD4Q9NVX7 518 aa20.3■□□□□ 0.84
CHTOP-202ENST00000368687 MYO7AQ13402 2215 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 A0A087X0B3 334 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 TTLL13PA6NNM8 815 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 ALDH2P05091 517 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 PROZP22891 400 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 GRM5P41594 1212 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 YARSP54577 528 aaKnown RBP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 NOLC1Q14978 699 aaKnown RBP eCLIP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 E2F4Q16254 413 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 DYMQ7RTS9 669 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 CCDC65Q8IXS2 484 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 ATXN2LQ8WWM7 1075 aaKnown RBP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 DHX58Q96C10 678 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 TARS2Q9BW92 718 aaKnown RBP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 PANK2Q9BZ23 570 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 RNF39Q9H2S5 420 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 NGRNQ9NPE2 291 aaKnown RBP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 OLFML3Q9NRN5 406 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 HCSTQ9UBK5 93 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 USP25Q9UHP3 1055 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 TBX20Q9UMR3 447 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.29■□□□□ 0.84
CHTOP-202ENST00000368687 ATG2AQ2TAZ0 1938 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 CITO14578 2027 aa20.29■□□□□ 0.84
CHTOP-202ENST00000368687 MUC3AQ02505 3323 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 MYMKA6NI61 221 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 HNRNPDLO14979 420 aaKnown RBP20.28■□□□□ 0.84
CHTOP-202ENST00000368687 CLDN3O15551 220 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 RECQL4O94761 1208 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 POMCP01189 267 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 PIGRP01833 764 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 EDN1P05305 212 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 GALTP07902 379 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 CMA1P23946 247 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 AKAP5P24588 427 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
CHTOP-202ENST00000368687 LIG4P49917 911 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 GTF2BQ00403 316 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 DSC1Q08554 894 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 EEF1DP3Q658K8 133 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 CNNM4Q6P4Q7 775 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 STXBP4Q6ZWJ1 553 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 CEP57L1Q8IYX8 460 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 HLA-CQ95604 372 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 DNAJC19Q96DA6 116 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 GBP3Q9H0R5 595 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 CDT1Q9H211 546 aa20.28■□□□□ 0.84
CHTOP-202ENST00000368687 KCNH3Q9ULD8 1083 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms