RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 EHD2Q9NZN4 543 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 GCNT4Q9P109 453 aa11.52□□□□□ -0.56
TPM3-212ENST00000368533 DCAF8L1A6NGE4 600 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 SLC26A4O43511 780 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 ELF1P32519 619 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 PAFAH1B1P43034 410 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 SMTNP53814 917 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 PTPROQ16827 1216 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 CELF3Q5SZQ8 465 aaKnown RBP11.52□□□□□ -0.57
TPM3-212ENST00000368533 CYP4F22Q6NT55 531 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 POMGNT1Q8WZA1 660 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 NLRP4Q96MN2 994 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 GPBP1L1Q9HC44 474 aaPredicted RBP11.52□□□□□ -0.57
TPM3-212ENST00000368533 ANKEF1Q9NU02 776 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.52□□□□□ -0.57
TPM3-212ENST00000368533 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 TBX20Q9UMR3 447 aa11.52□□□□□ -0.57
TPM3-212ENST00000368533 A0A1W2PQJ5 194 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 NOL4O94818 638 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 AFPP02771 609 aaKnown RBP11.51□□□□□ -0.57
TPM3-212ENST00000368533 EDN1P05305 212 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ADSSP30520 456 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 PSMC2P35998 433 aaKnown RBP11.51□□□□□ -0.57
TPM3-212ENST00000368533 ACOT2P49753 483 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 OSTNP61366 133 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 TMEM62Q0P6H9 643 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ARHGAP44Q17R89 818 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 STXBP4Q6ZWJ1 553 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ZBTB33Q86T24 672 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 TMEM130Q8N3G9 435 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 FAXDC2Q96IV6 333 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ACCSQ96QU6 501 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 MAFBQ9Y5Q3 323 aaPredicted RBP11.51□□□□□ -0.57
TPM3-212ENST00000368533 IGSF9BQ9UPX0 1349 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 EIF3DO15371 548 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM3-212ENST00000368533 PPP1R37O75864 691 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 STAM2O75886 525 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 DGAT1O75907 488 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 LYPLA2O95372 231 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ADRB2P07550 413 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 MYBL2P10244 700 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 CNGA1P29973 690 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ICAM3P32942 547 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 GNGT1P63211 74 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 EXOC3L4Q17RC7 722 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 BMT2Q1RMZ1 405 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ZBTB41Q5SVQ8 909 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SFMBT2Q5VUG0 894 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 WDR93Q6P2C0 686 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 RHPN2Q8IUC4 686 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 PLEKHO2Q8TD55 490 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 RPGRIP1Q96KN7 1286 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SENP7Q9BQF6 1050 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 FAM213AQ9BRX8 229 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ARHGAP39Q9C0H5 1083 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SEL1LQ9UBV2 794 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SNX12Q9UMY4 172 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 EVPLQ92817 2033 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ANO9A1A5B4 782 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SNAI1O95863 264 aaPredicted RBP11.51□□□□□ -0.57
TPM3-212ENST00000368533 MUTP22033 750 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 GLRA2P23416 452 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 HTRA3P83110 453 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 TTLL4Q14679 1199 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SLC9C1Q4G0N8 1177 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 FIGNQ5HY92 759 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SLC39A4Q6P5W5 647 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 SND1Q7KZF4 910 aaKnown RBP eCLIP11.51□□□□□ -0.57
TPM3-212ENST00000368533 TAS1R3Q7RTX0 852 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 ANKRD23Q86SG2 305 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 PRPF31Q8WWY3 499 aaKnown RBP11.51□□□□□ -0.57
TPM3-212ENST00000368533 CABS1Q96KC9 395 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 IFT74Q96LB3 600 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 FLRT1Q9NZU1 646 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 KCND2Q9NZV8 630 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 HPCAL4Q9UM19 191 aa11.51□□□□□ -0.57
TPM3-212ENST00000368533 A0A0G2JMZ2 1700 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 RDXP35241 583 aaKnown RBP11.5□□□□□ -0.57
TPM3-212ENST00000368533 MAP2K1Q02750 393 aaPredicted RBP11.5□□□□□ -0.57
TPM3-212ENST00000368533 RGMBQ6NW40 437 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 DEPTORQ8TB45 409 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 NOX5Q96PH1 765 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 SPAG5Q96R06 1193 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 LRRC1Q9BTT6 524 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 TARS2Q9BW92 718 aaKnown RBP11.5□□□□□ -0.57
TPM3-212ENST00000368533 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.5□□□□□ -0.57
TPM3-212ENST00000368533 EMSYQ7Z589 1322 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 GOLGA6CA6NDK9 693 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 CALCAP01258 141 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 GOLGA6DP0CG33 693 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 USP8P40818 1118 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 PPP3CAQ08209 521 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 TMEM132AQ24JP5 1023 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 SCARA3Q6AZY7 606 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 PDXDC1Q6P996 788 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 CCDC62Q6P9F0 684 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 PLEKHH3Q7Z736 793 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 FAM76AQ8TAV0 307 aa11.5□□□□□ -0.57
TPM3-212ENST00000368533 HDAC7Q8WUI4 952 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms