RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 IRS2Q9Y4H2 1338 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 MYO3AQ8NEV4 1616 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 C17orf102A2RUQ5 167 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 M0QYT0 321 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PRDM1O75626 825 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 KLRC2P26717 231 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 AVPR1AP37288 418 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 TRIM25Q14258 630 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 HHIPL2Q6UWX4 724 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 RFX8Q6ZV50 586 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 DSG4Q86SJ6 1040 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 MLKLQ8NB16 471 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PBXIP1Q96AQ6 731 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 IL17RAQ96F46 866 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 POP1Q99575 1024 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 TUBB6Q9BUF5 446 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 TRIM54Q9BYV2 358 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 HACD3Q9P035 362 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PCDHB11Q9Y5F2 797 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 CPS1P31327 1500 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 LRRIQ3A6PVS8 624 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 KLRF2D3W0D1 207 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 OCM2P0CE71 109 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 OCMP0CE72 109 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 ITGA4P13612 1032 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 HOXA7P31268 230 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PPM1AP35813 382 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 KPNA2P52292 529 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 EPHB3P54753 998 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 HMGCS2P54868 508 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 ADCY1Q08828 1119 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 MTA1Q13330 715 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 RCSD1Q6JBY9 416 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 Q6ZUG5 572 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 NEK10Q6ZWH5 1172 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 NLRP9Q7RTR0 991 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PGBD1Q96JS3 809 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 NRDE2Q9H7Z3 1164 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 ECT2Q9H8V3 914 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PAPOLBQ9NRJ5 636 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 CYTH4Q9UIA0 394 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 R3HDM2Q9Y2K5 976 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 USP19O94966 1318 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 POTEB3A0JP26 581 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 K7ERI5 159 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 STRNO43815 780 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 NBNO60934 754 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 GH2P01242 217 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 SFNP31947 248 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PPARAQ07869 468 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 MMEL1Q495T6 779 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 FAM133BQ5BKY9 247 aaKnown RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 ATAT1Q5SQI0 421 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 SULT1C3Q6IMI6 304 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 POTEBQ6S5H4 581 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 LRRC69Q6ZNQ3 347 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 CCDC51Q96ER9 411 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 DCUN1D1Q96GG9 259 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 DYDC2Q96IM9 177 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 TCEANC2Q96MN5 208 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 NUP85Q9BW27 656 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 MYOZ2Q9NPC6 264 aa9.15□□□□□ -0.94
SYNE1-206ENST00000367253 SUCLA2Q9P2R7 463 aaPredicted RBP9.15□□□□□ -0.94
SYNE1-206ENST00000367253 ADCY9O60503 1353 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 CRB1P82279 1406 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 TTLL13PA6NNM8 815 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 SLC9A3R1O14745 358 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-206ENST00000367253 GPAA1O43292 621 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 ENTPD3O75355 529 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 AKR1A1P14550 325 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 C21orf59P57076 290 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 IL9RQ01113 521 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 IQCF2Q8IXL9 164 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 TEX9Q8N6V9 391 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 AHCYL2Q96HN2 611 aaKnown RBP9.15□□□□□ -0.95
SYNE1-206ENST00000367253 POLR3CQ9BUI4 534 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-206ENST00000367253 OSBPL10Q9BXB5 764 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 ZWILCHQ9H900 591 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 V9GY48 417 aaPredicted RBP9.15□□□□□ -0.95
SYNE1-206ENST00000367253 SPACA6W5XKT8 324 aa9.15□□□□□ -0.95
SYNE1-206ENST00000367253 THAP12O43422 761 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 BAIAP3O94812 1187 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 LCA5LO95447 670 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 PYGLP06737 847 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 FAM200BP0CF97 657 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 GAP43P17677 238 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 DNAJA1P31689 397 aaKnown RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 CTTNQ14247 550 aaKnown RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 RCN2Q14257 317 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 XPO6Q96QU8 1125 aaKnown RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 CNPY3Q9BT09 278 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 LSM14BQ9BX40 385 aaKnown RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 SPATA16Q9BXB7 569 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 PLEKHA4Q9H4M7 779 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 USP18Q9UMW8 372 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 COL15A1P39059 1388 aa9.14□□□□□ -0.95
SYNE1-206ENST00000367253 SKAP2O75563 359 aaPredicted RBP9.14□□□□□ -0.95
SYNE1-206ENST00000367253 IGHDP01880 384 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms