RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 RARGP13631 454 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 ATF2P15336 505 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 HSPA6P17066 643 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 KRT15P19012 456 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 ATP5DP30049 168 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 MXI1P50539 228 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 SESN3P58005 492 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 SEPT7Q16181 437 aaKnown RBP8.77□□□□□ -1.01
CD46-208ENST00000367042 KAZNQ674X7 775 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 EPM2AIP1Q7L775 607 aaPredicted RBP8.77□□□□□ -1.01
CD46-208ENST00000367042 SLC47A2Q86VL8 602 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
CD46-208ENST00000367042 SLC13A5Q86YT5 568 aaPredicted RBP8.77□□□□□ -1.01
CD46-208ENST00000367042 FBF1Q8TES7 1133 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 PITPNM3Q9BZ71 974 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 EPB41L4BQ9H329 900 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 LY75O60449 1722 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 PFASO15067 1338 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 COL24A1Q17RW2 1714 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 CFAP73A6NFT4 308 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 HIP1RO75146 1068 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 GAS8O95995 478 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 NDUFB10O96000 172 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 FOSP01100 380 aaPredicted RBP8.77□□□□□ -1.01
CD46-208ENST00000367042 MAPK4P31152 587 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 VAMP7P51809 220 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 GABPAQ06546 454 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 SPIRE1Q08AE8 756 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 SETDB1Q15047 1291 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 CLUL1Q15846 466 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 WLSQ5T9L3 541 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 SAAL1Q96ER3 474 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 CCDC77Q9BR77 488 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 CBWD1Q9BRT8 395 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 ADAM7Q9H2U9 754 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 ANAPC5Q9UJX4 755 aa8.77□□□□□ -1.01
CD46-208ENST00000367042 EP400Q96L91 3159 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 GTPBP10A4D1E9 387 aaKnown RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 RASA4BC9J798 803 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 RASA4O43374 803 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 SLITRK3O94933 977 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 UPP2O95045 317 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 GH2P01242 217 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 KRT16P08779 473 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 BMP3P12645 472 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 IL1R1P14778 569 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 CHKAP35790 457 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 COPS2P61201 443 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 ABCB5Q2M3G0 1257 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 DPY19L2P1Q6NXN4 242 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 ZNF720Q7Z2F6 126 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 FMNL3Q8IVF7 1028 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 ZNF622Q969S3 477 aaKnown RBP eCLIP8.76□□□□□ -1.012e-9■□□□□ 9.2
CD46-208ENST00000367042 CENPTQ96BT3 561 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 LXNQ9BS40 222 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 NCANO14594 1321 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 CNTNAP4Q9C0A0 1308 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 MYCNP04198 464 aaPredicted RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 PCK1P35558 622 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 ITGA8P53708 1063 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 MTM1Q13496 603 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 RBM26Q5T8P6 1007 aaKnown RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 PRUNE1Q86TP1 453 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 ERICH1Q86X53 443 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 CERS5Q8N5B7 392 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 FAM84AQ96KN4 292 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 CCDC17Q96LX7 622 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 NACC1Q96RE7 527 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 DNAJC18Q9H819 358 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 OLFML3Q9NRN5 406 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 CHST7Q9NS84 486 aa8.76□□□□□ -1.01
CD46-208ENST00000367042 LARSQ9P2J5 1176 aaKnown RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 TTC7AQ9ULT0 858 aaPredicted RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.76□□□□□ -1.01
CD46-208ENST00000367042 WDR91A4D1P6 747 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 DDTLA6NHG4 134 aaPredicted RBP8.75□□□□□ -1.01
CD46-208ENST00000367042 RTN2O75298 545 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 MYBL1P10243 752 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 GBP1P32455 592 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 PTGIRP43119 386 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 NCALDP61601 193 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 PLCB3Q01970 1234 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 PPP3CAQ08209 521 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 DNAJC3Q13217 504 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 TAF11Q15544 211 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 MIGA2Q7L4E1 593 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 PIGWQ7Z7B1 504 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 ZDHHC14Q8IZN3 488 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 ZSWIM2Q8NEG5 633 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 SEC14L1Q92503 715 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 WNT8AQ9H1J5 351 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 KLHL11Q9NVR0 708 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 C15orf41Q9Y2V0 281 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 ARL2BPQ9Y2Y0 163 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 GAKO14976 1311 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 GSTA1P08263 222 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 SREBF1P36956 1147 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 MSH2P43246 934 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 SP4Q02446 784 aa8.75□□□□□ -1.01
CD46-208ENST00000367042 CRYMQ14894 314 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms