RNA–Protein interactions for RNA: ENST00000366977.7

NSL1-202, Transcript of NSL1, MIS12 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSL1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSL1-202ENST00000366977 RPAP3Q9H6T3 665 aaPredicted RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 SLC38A10Q9HBR0 1119 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 DNAJC17Q9NVM6 304 aaKnown RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 SLC12A6Q9UHW9 1150 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 PNMA2Q9UL42 364 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 TBX20Q9UMR3 447 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 UTP11Q9Y3A2 253 aaKnown RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 COL11A1P12107 1806 aaPredicted RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 DENND3A2RUS2 1198 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 RGS20O76081 388 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 FGFR4P22455 802 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 ANXA13P27216 316 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 GPC5P78333 572 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 SNX1Q13596 522 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 KRT71Q3SY84 523 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 PRUNE1Q86TP1 453 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 EFCAB13Q8IY85 973 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 FAM71AQ8IYT1 594 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 CCDC26Q8TAB7 109 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 ZNF526Q8TF50 670 aaPredicted RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 ZNF516Q92618 1163 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 ZKSCAN4Q969J2 545 aaPredicted RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 ZBED3Q96IU2 234 aaPredicted RBP11.86□□□□□ -0.51
NSL1-202ENST00000366977 MTFR1LQ9H019 292 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 SEMA4AQ9H3S1 761 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 MYOZ2Q9NPC6 264 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 PXMP2Q9NR77 195 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 KCND2Q9NZV8 630 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 GABBR1Q9UBS5 961 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 SYNPO2Q9UMS6 1093 aa11.86□□□□□ -0.51
NSL1-202ENST00000366977 TLDC2A0PJX2 215 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 HMGB1P1B2RPK0 211 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 TBC1D12O60347 775 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 PLA2G6O60733 806 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 ASNSP08243 561 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 RARAP10276 462 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 BCRP11274 1271 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CNGA1P29973 690 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 SLCO1A2P46721 670 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 NCKAP1LP55160 1127 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 IFI35P80217 286 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 SIX1Q15475 284 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 ZBTB41Q5SVQ8 909 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 DLK2Q6UY11 383 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 PARD3BQ8TEW8 1205 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 C1orf54Q8WWF1 131 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 ZNF653Q96CK0 615 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 FMO2Q99518 471 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 ERP44Q9BS26 406 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CARD9Q9H257 536 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 DBR1Q9UK59 544 aaKnown RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 DAAM1Q9Y4D1 1078 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 PCDHA3Q9Y5H8 950 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 PTPRJQ12913 1337 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 GRIN3BO60391 1043 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 STBD1O95210 358 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CPP00450 1065 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CYP11B1P15538 503 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 BYSLQ13895 437 aaKnown RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 TRIP13Q15645 432 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 SEZ6Q53EL9 994 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 LRIG3Q6UXM1 1119 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 TADA2BQ86TJ2 420 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 TMEM130Q8N3G9 435 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 ZNF564Q8TBZ8 553 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 DDX1Q92499 740 aaKnown RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 RAPGEF5Q92565 580 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 CD101Q93033 1021 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 HAPLN2Q9GZV7 340 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 TMEM206Q9H813 350 aa11.85□□□□□ -0.51
NSL1-202ENST00000366977 TTC7AQ9ULT0 858 aaPredicted RBP11.85□□□□□ -0.51
NSL1-202ENST00000366977 RGPD3A6NKT7 1758 aaPredicted RBP11.84□□□□□ -0.51
NSL1-202ENST00000366977 RGPD4Q7Z3J3 1758 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 LOXHD1Q8IVV2 1947 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 CLDN3O15551 220 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 RTN2O75298 545 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 PPFIA2O75334 1257 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 EDN1P05305 212 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 MUTP22033 750 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 CCDC38Q502W7 563 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ODF2Q5BJF6 829 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ARHGEF16Q5VV41 709 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 RNF207Q6ZRF8 634 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 SV2AQ7L0J3 742 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ANKS1BQ7Z6G8 1248 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 SUGP1Q8IWZ8 645 aaKnown RBP11.84□□□□□ -0.51
NSL1-202ENST00000366977 EPS8L3Q8TE67 593 aaKnown RBP11.84□□□□□ -0.51
NSL1-202ENST00000366977 CPA5Q8WXQ8 436 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 LRRC45Q96CN5 670 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ZBTB45Q96K62 511 aaPredicted RBP11.84□□□□□ -0.51
NSL1-202ENST00000366977 FAM213AQ9BRX8 229 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 DEFB129Q9H1M3 183 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 XPNPEP1Q9NQW7 623 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ZNRF3Q9ULT6 936 aa11.84□□□□□ -0.51
NSL1-202ENST00000366977 ATP8B3O60423 1300 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms