RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 PRRT2Q7Z6L0 340 aaPredicted RBP9.09□□□□□ -0.95
H3F3A-201ENST00000366813 OSBP2Q969R2 916 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 EXOC2Q96KP1 924 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 CDC5LQ99459 802 aaKnown RBP9.09□□□□□ -0.95
H3F3A-201ENST00000366813 PRDM12Q9H4Q4 367 aa9.09□□□□□ -0.95
H3F3A-201ENST00000366813 A0A1B0GTL3 188 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 SMIM22K7EJ46 135 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 SNAP23O00161 211 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 ENPP3O14638 875 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 PLA2G1BP04054 148 aaKnown RBP9.08□□□□□ -0.96
H3F3A-201ENST00000366813 RBM10P98175 930 aaKnown RBP9.08□□□□□ -0.96
H3F3A-201ENST00000366813 PLP2Q04941 152 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 SKOR2Q2VWA4 1001 aaPredicted RBP9.08□□□□□ -0.96
H3F3A-201ENST00000366813 FAM209AQ5JX71 171 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 SCUBE1Q8IWY4 988 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 ANKRD13CQ8N6S4 541 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 NETO2Q8NC67 525 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 TRIB2Q92519 343 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 TSPAN17Q96FV3 270 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 CDC6Q99741 560 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 TSPYL4Q9UJ04 414 aa9.08□□□□□ -0.96
H3F3A-201ENST00000366813 TRBV23-1A0A0A0MS06 115 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 DLX3O60479 287 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 PPP1R11O60927 126 aaPredicted RBP9.07□□□□□ -0.96
H3F3A-201ENST00000366813 CPP00450 1065 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 PMLP29590 882 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 KCNJ6P48051 423 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 MAP4K2Q12851 820 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 MAP3K21Q5TCX8 1036 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 LIPIQ6XZB0 460 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 B3GNT8Q7Z7M8 397 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 TMEM145Q8NBT3 493 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 KCTD13Q8WZ19 329 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 KISS1RQ969F8 398 aaPredicted RBP9.07□□□□□ -0.96
H3F3A-201ENST00000366813 C1orf159Q96HA4 380 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 DHRS4Q9BTZ2 278 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 FANCLQ9NW38 375 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 CHPF2Q9P2E5 772 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 GJD2Q9UKL4 321 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 WDFY4Q6ZS81 3184 aa9.07□□□□□ -0.96
H3F3A-201ENST00000366813 CCDC163A0A0D9SF12 145 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 FUCA1P04066 466 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 THBDP07204 575 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 HSP90B1P14625 803 aaKnown RBP9.06□□□□□ -0.96
H3F3A-201ENST00000366813 ECI1P42126 302 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 EPHB4P54760 987 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 KRT24Q2M2I5 525 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 VWA3BQ502W6 1294 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 SLC35F1Q5T1Q4 408 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 NT5DC1Q5TFE4 455 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 DBX2Q6ZNG2 339 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 HOMER1Q86YM7 354 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 KREMEN2Q8NCW0 462 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 SMCR8Q8TEV9 937 aaPredicted RBP9.06□□□□□ -0.96
H3F3A-201ENST00000366813 APPBP2Q92624 585 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 TIFAQ96CG3 184 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 SPATA25Q9BR10 227 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 GREM2Q9H772 168 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.06□□□□□ -0.969e-6■□□□□ 10.4
H3F3A-201ENST00000366813 NUDCQ9Y266 331 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 ATP11BQ9Y2G3 1177 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 ZDBF2Q9HCK1 2354 aa9.06□□□□□ -0.96
H3F3A-201ENST00000366813 C7orf72A4D263 438 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 PCCAP05165 728 aaPredicted RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CYP2B6P20813 491 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CCND3P30281 292 aaPredicted RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 KCNJ4P48050 445 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 FKBP1AP62942 108 aaKnown RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 UBXN11Q5T124 520 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 GADL1Q6ZQY3 521 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 NPLOC4Q8TAT6 608 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 FRS2Q8WU20 508 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 IPO9Q96P70 1041 aaKnown RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 MTA3Q9BTC8 594 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 ZNF341Q9BYN7 854 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 KRTAP9-3Q9BYQ3 159 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 GPRC5CQ9NQ84 441 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CLEC1BQ9P126 229 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 FBLN5Q9UBX5 448 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 MRPS23Q9Y3D9 190 aaKnown RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CFAP54Q96N23 3096 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 REV3LO60673 3130 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 LTBP2Q14767 1821 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CXCL11O14625 94 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CDC45O75419 566 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 HSPA5P11021 654 aaKnown RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 CACNB2Q08289 660 aaPredicted RBP9.05□□□□□ -0.96
H3F3A-201ENST00000366813 TTLL11Q8NHH1 800 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 SMARCC2Q8TAQ2 1214 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 UIMC1Q96RL1 719 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 MYD88Q99836 296 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 BDH2Q9BUT1 245 aa9.05□□□□□ -0.96
H3F3A-201ENST00000366813 ARAP2Q8WZ64 1704 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 SH3D21A4FU49 640 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 TRIM43BA6NCK2 446 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 NTRK1P04629 796 aa9.04□□□□□ -0.96
H3F3A-201ENST00000366813 IL1R1P14778 569 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms