RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 ANKRD40Q6AI12 368 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 RIT2Q99578 217 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 RBAKQ9NYW8 714 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 TEX33O43247 280 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CYTH2Q99418 400 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZWILCHQ9H900 591 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 SRGAP2CP0DJJ0 459 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 HPS3Q969F9 1004 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CHGBP05060 677 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 BCAR1P56945 870 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CFAP36Q96G28 342 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 KLHL8Q9P2G9 620 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 PLAGL2Q9UPG8 496 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CNTNAP4Q9C0A0 1308 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 SPDYE16A6NNV3 312 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 UBXN2AP68543 259 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 SPDYE2Q495Y8 402 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 KIAA1755Q5JYT7 1200 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 MEFVO15553 781 aaPredicted RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 UCHL3P15374 230 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARHGAP10A1A4S6 786 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 TTC36A6NLP5 189 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 IL18RAPO95256 599 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CYP2D6P10635 497 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 BRAFP15056 766 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 CATSPER4Q7RTX7 472 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 STAMBPL1Q96FJ0 436 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 ADAMTS13Q76LX8 1427 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 OCRLQ01968 901 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 RARS2Q5T160 578 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 SENP7Q9BQF6 1050 aa12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 PPARGC1AQ9UBK2 798 aaKnown RBP12.76□□□□□ -0.37
CDC42BPA-203ENST00000366766 PSMD3O43242 534 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 ARHGDIAP52565 204 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 PRKG1Q13976 671 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TBCCQ15814 346 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 EAPPQ56P03 285 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 POLR3CQ9BUI4 534 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 AGO2Q9UKV8 859 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 MTSS1O43312 755 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TC2NQ8N9U0 490 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 CELF1Q92879 486 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 POLR3FQ9H1D9 316 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 NSMCE4AQ9NXX6 385 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 GNGT2O14610 69 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 HAUS5O94927 633 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TSPY1Q01534 308 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 EFHC2Q5JST6 749 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TNIP3Q96KP6 325 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 CNTNAP5Q8WYK1 1306 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 GTPBP10A4D1E9 387 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 SRGAP2O75044 1071 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 ATP1A1P05023 1023 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 YWHABP31946 246 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 FNTAP49354 379 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 PSMC1P62191 440 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 C7orf31Q8N865 590 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 KCNF1Q9H3M0 494 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 EML4Q9HC35 981 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 RNF146Q9NTX7 359 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 RAD17O75943 681 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 RFC5P40937 340 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 E9PMD0 336 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 GSTA4O15217 222 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 SERPINB9P50453 376 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 GRM1Q13255 1194 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 SKA2Q8WVK7 121 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 CENPCQ03188 943 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 ANO5Q75V66 913 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 RPA1P27694 616 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 NKX1-1Q15270 411 aaPredicted RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 MTBPQ96DY7 904 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 YY1AP1Q9H869 796 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TMCC1O94876 653 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 MDH1P40925 334 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 PPP4CP60510 307 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 EFHBQ8N7U6 833 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 APBB2Q92870 758 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 PCDHB2Q9Y5E7 798 aa12.75□□□□□ -0.37
CDC42BPA-203ENST00000366766 TMEM247A6NEH6 219 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZNF18P17022 549 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 XKR3Q5GH77 459 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 CCDC138Q96M89 665 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 DNAJC7Q99615 494 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 C3P01024 1663 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 A0A0G2JND7 137 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 MAGEB2O15479 319 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 DYNC1I2Q13409 638 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 SEPT12Q8IYM1 358 aa12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 AGGF1Q8N302 714 aaeCLIP12.74□□□□□ -0.379e-7■■□□□ 13.8
CDC42BPA-203ENST00000366766 DDX47Q9H0S4 455 aaKnown RBP12.74□□□□□ -0.37
CDC42BPA-203ENST00000366766 ZNF212Q9UDV6 495 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms