RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 ZNF267Q14586 743 aaPredicted RBP5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 MLC1Q15049 377 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 FAM214AQ32MH5 1076 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 FAM102BQ5T8I3 360 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 TCTN3Q6NUS6 607 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 LILRA6Q6PI73 481 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 EPM2AIP1Q7L775 607 aaPredicted RBP5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 MYO1HQ8N1T3 1032 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 OR7D4Q8NG98 312 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 CCHCR1Q8TD31 782 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 HDAC10Q969S8 669 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 TEPSINQ96N21 525 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 OR14A2Q96R54 314 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 UHRF1Q96T88 793 aaPredicted RBP5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 NUP88Q99567 741 aaPredicted RBP5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 C7orf25Q9BPX7 421 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 TCF25Q9BQ70 676 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 PDCD2LQ9BRP1 358 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 BCO1Q9HAY6 547 aa5.6□□□□□ -1.51
RNU6-560P-201ENST00000364007 FAM171A2A8MVW0 826 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 FOXS1O43638 330 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 AP1G1O43747 822 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 PTPN7P35236 360 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 NPEPPSP55786 919 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 APBA1Q02410 837 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 DSC2Q02487 901 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 FZD5Q13467 585 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 PRAMEF14Q5SWL7 426 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 IFIT1BQ5T764 474 aaKnown RBP5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 FAM111BQ6SJ93 734 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 USP45Q70EL2 814 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 TCEAL8Q8IYN2 117 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 TRMT2AQ8IZ69 625 aaKnown RBP5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 FUKQ8N0W3 1084 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 ZGPATQ8N5A5 531 aaKnown RBP5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 CLIP3Q96DZ5 547 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 CEP95Q96GE4 821 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 RBM15Q96T37 977 aaKnown RBP eCLIP5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 PLA2G3Q9NZ20 509 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 PCDHB1Q9Y5F3 818 aa5.59□□□□□ -1.51
RNU6-560P-201ENST00000364007 NRP1O14786 923 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 ENDOD1O94919 500 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 GASTP01350 101 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 AMY1AP04745 511 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 FPR1P21462 350 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 CRHR1P34998 444 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 FOXL1Q12952 345 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 TARDBPQ13148 414 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 MRPL49Q13405 166 aaKnown RBP5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 GRM7Q14831 915 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 MFSD14BQ5SR56 506 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 GLB1LQ6UWU2 654 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 TTLL10Q6ZVT0 673 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 MIGA2Q7L4E1 593 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 MAGEB6Q8N7X4 407 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 TTC8Q8TAM2 541 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 HPS3Q969F9 1004 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 AIFM3Q96NN9 605 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 DMRTA2Q96SC8 542 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 CDC5LQ99459 802 aaKnown RBP5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 SLC12A5Q9H2X9 1139 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 NELFAQ9H3P2 528 aa5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZFR2Q9UPR6 939 aaKnown RBP5.58□□□□□ -1.52
RNU6-560P-201ENST00000364007 HOXA3O43365 443 aaPredicted RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 OFD1O75665 1012 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 SYN1P17600 705 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 PCSK1P29120 753 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 RPS19P39019 145 aaKnown RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 GZMKP49863 264 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 GTF2H3Q13889 308 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 ATAT1Q5SQI0 421 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 NXNQ6DKJ4 435 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 CXorf57Q6NSI4 855 aaKnown RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 B3GNT9Q6UX72 402 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 CIR1Q86X95 450 aaPredicted RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 XYLT1Q86Y38 959 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 GRAMD1CQ8IYS0 662 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 SLC35G2Q8TBE7 412 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 ARL8AQ96BM9 186 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 IL17RAQ96F46 866 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 ZNF512Q96ME7 567 aaPredicted RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 SENP6Q9GZR1 1112 aaPredicted RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 AJAP1Q9UKB5 411 aaPredicted RBP5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 SH3BP1Q9Y3L3 701 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 ACTL7AQ9Y615 435 aa5.57□□□□□ -1.52
RNU6-560P-201ENST00000364007 ATRNL1Q5VV63 1379 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 MYBBP1AQ9BQG0 1328 aaKnown RBP5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 LRRC14BA6NHZ5 514 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 MYBP10242 640 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 HSPA6P17066 643 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 GUCY1A2P33402 732 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 MSX2P35548 267 aaPredicted RBP5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 FBLN7Q53RD9 439 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 FKBP15Q5T1M5 1219 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 ANKS6Q68DC2 871 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 MVB12AQ96EY5 273 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 BDH2Q9BUT1 245 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 EPC1Q9H2F5 836 aa5.56□□□□□ -1.52
RNU6-560P-201ENST00000364007 LANCL2Q9NS86 450 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms