RNA–Protein interactions for RNA: ENST00000363237.1

RNU6-1249P-201, Transcript of RNA, U6 small nuclear 1249, pseudogene, humanhuman

BASIC

Gene RNU6-1249P, Length 111 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1249P-201ENST00000363237 A0A0A6YYJ9 748 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 A0A1W2PQJ5 194 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 F8W8V4 182 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SYT5O00445 386 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SGSM2O43147 1006 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 BAIAP3O94812 1187 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CELA3BP08861 270 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 VEGFAP15692 232 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CAPN3P20807 821 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 POLD1P28340 1107 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ELF1P32519 619 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KRT9P35527 623 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SUMO3P55854 103 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CDC42EP1Q00587 391 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MVKQ03426 396 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GRIN1Q05586 938 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GALNT1Q10472 559 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PRKG2Q13237 762 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MBTPS1Q14703 1052 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NOLC1Q14978 699 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NOMO1Q15155 1222 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TOMM20Q15388 145 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CIAPIN1Q6FI81 312 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GAREM2Q75VX8 874 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 BEND5Q7L4P6 421 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MILR1Q7Z6M3 343 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TXNRD3Q86VQ6 643 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GLB1L2Q8IW92 636 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RHOT1Q8IXI2 618 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FAM26EQ8N5C1 309 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ATG16L2Q8NAA4 619 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FANCBQ8NB91 859 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GPR156Q8NFN8 814 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ZBTB10Q96DT7 871 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SCARF2Q96GP6 870 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CLPTM1LQ96KA5 538 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SAMD11Q96NU1 681 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NOL10Q9BSC4 688 aaKnown RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MTG2Q9H4K7 406 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 WDCPQ9H6R7 721 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MANSC1Q9H8J5 431 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CNTD2Q9H8S5 307 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 WASH6PQ9NQA3 447 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TBC1D22BQ9NU19 505 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TDP1Q9NUW8 608 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 UCKL1Q9NWZ5 548 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CALCOCO1Q9P1Z2 691 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 LRFN1Q9P244 771 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ARHGAP28Q9P2N2 729 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 IMPACTQ9P2X3 320 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GRHPRQ9UBQ7 328 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FBLN5Q9UBX5 448 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FEZ2Q9UHY8 353 aaPredicted RBP4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ACSL6Q9UKU0 697 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 AFG3L2Q9Y4W6 797 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PCDHA3Q9Y5H8 950 aa4.36□□□□□ -1.71
RNU6-1249P-201ENST00000363237 HMX2A2RU54 273 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NFIBO00712 420 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NPC1O15118 1278 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CUTAO60888 179 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PHF2O75151 1096 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ENDOD1O94919 500 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DDX58O95786 925 aaKnown RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FTH1P19P0C7X4 201 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 GLI4P10075 376 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 XBP1P17861 261 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 EN2P19622 333 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FGFR2P21802 821 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FUT4P22083 530 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PTGS1P23219 599 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SERPINF1P36955 418 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ITGA8P53708 1063 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NUCB1Q02818 461 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NFATC3Q12968 1075 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 PTK2BQ14289 1009 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 RAB39AQ14964 217 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CPSF6Q16630 551 aaKnown RBP eCLIP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 AOC3Q16853 763 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CCDC96Q2M329 555 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 KHDC1Q4VXA5 237 aaKnown RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ZNF385CQ66K41 422 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 CEP128Q6ZU80 1094 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 BRINP3Q76B58 766 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TBC1D1Q86TI0 1168 aaPredicted RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 TMEM151AQ8N4L1 468 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SVOPQ8N4V2 548 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FBXL6Q8N531 539 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ANKS4BQ8N8V4 417 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 FAM181AQ8N9Y4 354 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 OR2I1PQ8NGU4 316 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NETO1Q8TDF5 533 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 BRIX1Q8TDN6 353 aaKnown RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 ASB11Q8WXH4 323 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MUL1Q969V5 352 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 NMD3Q96D46 503 aaKnown RBP4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 DDX11Q96FC9 970 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 MFSD14AQ96MC6 490 aa4.35□□□□□ -1.71
RNU6-1249P-201ENST00000363237 SERINC2Q96SA4 455 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms