RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 HIBADHP31937 336 aaKnown RBP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 CASRP41180 1078 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 WASP42768 502 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 ADKP55263 362 aaKnown RBP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 U2AF1Q01081 240 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 EFEMP1Q12805 493 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 FOXL1Q12952 345 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 SP140Q13342 867 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 MRPL49Q13405 166 aaKnown RBP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 ICAM4Q14773 271 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 PCBP2Q15366 365 aaKnown RBP eCLIP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 ELAVL1Q15717 326 aaKnown RBP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 MST1LQ2TV78 715 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 METTL24Q5JXM2 366 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 TMEM240Q5SV17 173 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 ODR4Q5SWX8 454 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 JADE3Q92613 823 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 TEKT5Q96M29 485 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 SENP6Q9GZR1 1112 aaPredicted RBP3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 KLC2Q9H0B6 622 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 AASDHPPTQ9NRN7 309 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 SCOCQ9UIL1 159 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 GIT1Q9Y2X7 761 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 TESMINQ9Y4I5 508 aa3.53□□□□□ -1.84
RNU6-428P-201ENST00000362942 PRR5-ARHGAP8B1AHC4 643 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 HOXA3O43365 443 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ACO1P21399 889 aaKnown RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 PTPN7P35236 360 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 FLT3LGP49771 235 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 KIF23Q02241 960 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 CRHR2Q13324 411 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 SAFB2Q14151 953 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ACAP1Q15027 740 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 TTF1Q15361 905 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 DCAF17Q5H9S7 520 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ZNF585AQ6P3V2 769 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 DOK3Q7L591 496 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 PRRT2Q7Z6L0 340 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 PQLC1Q8N2U9 271 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 PPM1NQ8N819 430 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 CASKIN2Q8WXE0 1202 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ST8SIA2Q92186 375 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 C8orf49Q96NF6 230 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 CAMKK2Q96RR4 588 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ADOQ96SZ5 270 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 NUP88Q99567 741 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 GPR20Q99678 358 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 CPPED1Q9BRF8 314 aaPredicted RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 C1QTNF3Q9BXJ4 246 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ENKD1Q9H0I2 346 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 AGO3Q9H9G7 860 aaKnown RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 METTL14Q9HCE5 456 aaKnown RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 CD248Q9HCU0 757 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 MAN1C1Q9NR34 630 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 TRPS1Q9UHF7 1281 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 TCEAL9Q9UHQ7 104 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ST6GALNAC2Q9UJ37 374 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 ANKRD6Q9Y2G4 727 aa3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 LUC7L2Q9Y383 392 aaKnown RBP3.52□□□□□ -1.85
RNU6-428P-201ENST00000362942 FZD9O00144 591 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 PJA2O43164 708 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 SGTAO43765 313 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 IL33O95760 270 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 ADRB1P08588 477 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 HMGB1P09429 215 aaKnown RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 SNRPA1P09661 255 aaKnown RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 AKAP5P24588 427 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 MAN2A2P49641 1150 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 ADAM17P78536 824 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 CNGB1Q14028 1251 aaPredicted RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 UAP1L1Q3KQV9 507 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 FAM47AQ5JRC9 791 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 RRP12Q5JTH9 1297 aaKnown RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 THEMIS2Q5TEJ8 643 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 MAMDC4Q6UXC1 1216 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 RSPH3Q86UC2 560 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 CPA6Q8N4T0 437 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 MDGA1Q8NFP4 955 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 ZFP28Q8NHY6 868 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 STAG1Q8WVM7 1258 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 NRG4Q8WWG1 115 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 ATXN2LQ8WWM7 1075 aaKnown RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 HSPBAP1Q96EW2 488 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 SLC2A13Q96QE2 648 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 TCF7L1Q9HCS4 588 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 TDP1Q9NUW8 608 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 INTUQ9ULD6 942 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 PNMA8BQ9ULN7 279 aaPredicted RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 JAG2Q9Y219 1238 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 SH3BP1Q9Y3L3 701 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 TSC22D4Q9Y3Q8 395 aa3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 CFAP20Q9Y6A4 193 aaKnown RBP3.51□□□□□ -1.85
RNU6-428P-201ENST00000362942 PRRG2O14669 202 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 PCDHGA12O60330 932 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 PPFIA4O75335 1185 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 RECQL4O94761 1208 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 C5AR1P21730 350 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 ACRV1P26436 265 aa3.5□□□□□ -1.85
RNU6-428P-201ENST00000362942 SREBF1P36956 1147 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms