RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 HSPBP1Q9NZL4 362 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 USP20Q9Y2K6 914 aa22.54■■□□□ 1.2
SHISA4-201ENST00000362011 PDCD11Q14690 1871 aaKnown RBP22.54■■□□□ 1.2
SHISA4-201ENST00000362011 SLC16A3O15427 465 aaKnown RBP22.53■■□□□ 1.2
SHISA4-201ENST00000362011 CSDE1O75534 798 aaKnown RBP22.53■■□□□ 1.2
SHISA4-201ENST00000362011 CTSHP09668 335 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 IQCF3P0C7M6 154 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 EPB41P11171 864 aaKnown RBP22.53■■□□□ 1.2
SHISA4-201ENST00000362011 SFPQP23246 707 aaKnown RBP eCLIP22.53■■□□□ 1.2
SHISA4-201ENST00000362011 FANCCQ00597 558 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 ATF7IP2Q5U623 682 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 CREBRFQ8IUR6 639 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 MYLIPQ8WY64 445 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 MKNK1Q9BUB5 465 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 LIMA1Q9UHB6 759 aaKnown RBP22.53■■□□□ 1.2
SHISA4-201ENST00000362011 STYXL1Q9Y6J8 313 aa22.53■■□□□ 1.2
SHISA4-201ENST00000362011 SCN5AQ14524 2016 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 KIAA0391O15091 583 aaKnown RBP22.52■■□□□ 1.2
SHISA4-201ENST00000362011 B4GALT5O43286 388 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 EXOC3O60645 756 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 TOM1L1O75674 476 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 SERPINC1P01008 464 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 ADSSP30520 456 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 MTIF2P46199 727 aaKnown RBP22.52■■□□□ 1.2
SHISA4-201ENST00000362011 FAAP100Q0VG06 881 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 FAM26DQ5JW98 314 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 TSHZ1Q6ZSZ6 1077 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 CATSPER4Q7RTX7 472 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 CCDC155Q8N6L0 562 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 XXYLT1Q8NBI6 393 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 ANKFY1Q9P2R3 1169 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 TNFSF13BQ9Y275 285 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 FRMD4BQ9Y2L6 1034 aa22.52■■□□□ 1.2
SHISA4-201ENST00000362011 PRUNE2Q8WUY3 3088 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 TTLL13PA6NNM8 815 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 TSPAN1O60635 241 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 CD4P01730 458 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 CHRNA1P02708 482 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 FGFR4P22455 802 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 PSMC2P35998 433 aaKnown RBP22.51■■□□□ 1.19
SHISA4-201ENST00000362011 CASP4P49662 377 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 MARSP56192 900 aaKnown RBP22.51■■□□□ 1.19
SHISA4-201ENST00000362011 NCBP1Q09161 790 aaKnown RBP22.51■■□□□ 1.19
SHISA4-201ENST00000362011 HSP90AA2PQ14568 343 aaPredicted RBP22.51■■□□□ 1.19
SHISA4-201ENST00000362011 KRT31Q15323 416 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 MPZL3Q6UWV2 235 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 CAGE1Q8TC20 777 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 TMEM40Q8WWA1 233 aa22.51■■□□□ 1.19
SHISA4-201ENST00000362011 ZBTB45Q96K62 511 aaPredicted RBP22.51■■□□□ 1.19
SHISA4-201ENST00000362011 N4BP3O15049 544 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 CLDN3O15551 220 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 AP5Z1O43299 807 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 AKAP3O75969 853 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 TPM2P07951 284 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 RAG1P15918 1043 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 ARF4P18085 180 aaPredicted RBP22.5■■□□□ 1.19
SHISA4-201ENST00000362011 PROZP22891 400 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 AXLP30530 894 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 RBL2Q08999 1139 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 FRMD5Q7Z6J6 570 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 FAM186BQ8IYM0 893 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 GPD1LQ8N335 351 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 ANP32BQ92688 251 aaKnown RBP22.5■■□□□ 1.19
SHISA4-201ENST00000362011 RNPC3Q96LT9 517 aaKnown RBP22.5■■□□□ 1.19
SHISA4-201ENST00000362011 TCHPQ9BT92 498 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 TRIM5Q9C035 493 aa22.5■■□□□ 1.19
SHISA4-201ENST00000362011 METTL14Q9HCE5 456 aaKnown RBP22.5■■□□□ 1.19
SHISA4-201ENST00000362011 AGO2Q9UKV8 859 aaKnown RBP22.5■■□□□ 1.19
SHISA4-201ENST00000362011 A0A0B4J269 797 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 MAPK13O15264 365 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 CBFA2T2O43439 604 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 PQBP1O60828 265 aaKnown RBP22.49■■□□□ 1.19
SHISA4-201ENST00000362011 LDHAP00338 332 aaKnown RBP22.49■■□□□ 1.19
SHISA4-201ENST00000362011 CKBP12277 381 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 COPB1P53618 953 aaKnown RBP22.49■■□□□ 1.19
SHISA4-201ENST00000362011 FPGSQ05932 587 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 BFSP2Q13515 415 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 NOLC1Q14978 699 aaKnown RBP eCLIP22.49■■□□□ 1.19
SHISA4-201ENST00000362011 ZNF568Q3ZCX4 644 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 FILIP1LQ4L180 1135 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 ZNF618Q5T7W0 954 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 SAAL1Q96ER3 474 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 CPB2Q96IY4 423 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 TUBGCP2Q9BSJ2 902 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 MSTO1Q9BUK6 570 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 HAPLN2Q9GZV7 340 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 KIAA1586Q9HCI6 787 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 TMEM39AQ9NV64 488 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 TAB2Q9NYJ8 693 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 IFNKQ9P0W0 207 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 ARMCX3Q9UH62 379 aaPredicted RBP22.49■■□□□ 1.19
SHISA4-201ENST00000362011 TBX21Q9UL17 535 aa22.49■■□□□ 1.19
SHISA4-201ENST00000362011 GOLGA8IPA6NC78 632 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 GOLGA8JA6NMD2 632 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 DCDC2CA8MYV0 355 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 ABLIM1O14639 778 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 RPS6KA5O75582 802 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 UBASH3AP57075 661 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 MCL1Q07820 350 aa22.48■■□□□ 1.19
SHISA4-201ENST00000362011 MAN2A1Q16706 1144 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms