RNA–Protein interactions for RNA: ENST00000360046.9

HOXA4-201, Transcript of homeobox A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA4, Length 1,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA4-201ENST00000360046 KRT13P13646 458 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 ARF4P18085 180 aaPredicted RBP23.84■■□□□ 1.41
HOXA4-201ENST00000360046 NCBP1Q09161 790 aaKnown RBP23.84■■□□□ 1.41
HOXA4-201ENST00000360046 NOLC1Q14978 699 aaKnown RBP eCLIP23.84■■□□□ 1.41
HOXA4-201ENST00000360046 MPZL3Q6UWV2 235 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 DHX38Q92620 1227 aaKnown RBP23.84■■□□□ 1.41
HOXA4-201ENST00000360046 PDLIM2Q96JY6 352 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 NDST4Q9H3R1 872 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 TNFSF13BQ9Y275 285 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 EXTL3O43909 919 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 EEF1DP3Q658K8 133 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 INTS8Q75QN2 995 aaKnown RBP23.84■■□□□ 1.41
HOXA4-201ENST00000360046 BORCS6Q96GS4 357 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 C11orf49Q9H6J7 331 aa23.84■■□□□ 1.41
HOXA4-201ENST00000360046 MAPK13O15264 365 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 PQBP1O60828 265 aaKnown RBP23.83■■□□□ 1.41
HOXA4-201ENST00000360046 ADRB2P07550 413 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 PROZP22891 400 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 MCL1Q07820 350 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 PCBP1Q15365 356 aaKnown RBP eCLIP23.83■■□□□ 1.41
HOXA4-201ENST00000360046 FKBP15Q5T1M5 1219 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 FBXL18Q96ME1 805 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 PDZD7Q9H5P4 517 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 KIAA1586Q9HCI6 787 aa23.83■■□□□ 1.41
HOXA4-201ENST00000360046 LDHAP00338 332 aaKnown RBP23.82■■□□□ 1.4
HOXA4-201ENST00000360046 CHRNA1P02708 482 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 COL6A1P12109 1028 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 ACOT2P49753 483 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 PPP2R3AQ06190 1150 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 BFSP1Q12934 665 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 HSP90AA2PQ14568 343 aaPredicted RBP23.82■■□□□ 1.4
HOXA4-201ENST00000360046 TMC6Q7Z403 805 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 PPP1R9BQ96SB3 815 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 PTPRHQ9HD43 1115 aa23.82■■□□□ 1.4
HOXA4-201ENST00000360046 KIAA0100Q14667 2235 aaKnown RBP23.82■■□□□ 1.4
HOXA4-201ENST00000360046 ZNF233A6NK53 670 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 ABLIM1O14639 778 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 TRIM71Q2Q1W2 868 aaKnown RBP23.81■■□□□ 1.4
HOXA4-201ENST00000360046 VSTM4Q8IW00 320 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 FAM126BQ8IXS8 530 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 CDT1Q9H211 546 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 TLR3O15455 904 aaKnown RBP23.81■■□□□ 1.4
HOXA4-201ENST00000360046 TRIM49P0CI25 452 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 TRIM49CP0CI26 452 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 VAMP7P51809 220 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 MGAT3Q09327 533 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 KCNH2Q12809 1159 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 SEZ6Q53EL9 994 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 ZBTB41Q5SVQ8 909 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 NECAB2Q7Z6G3 386 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 TNS4Q8IZW8 715 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 SLC35C1Q96A29 364 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 ADPGKQ9BRR6 497 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 NOC2LQ9Y3T9 749 aaKnown RBP23.81■■□□□ 1.4
HOXA4-201ENST00000360046 MROH7Q68CQ1 1323 aa23.81■■□□□ 1.4
HOXA4-201ENST00000360046 OGTO15294 1046 aa23.8■■□□□ 1.4
HOXA4-201ENST00000360046 AFPP02771 609 aaKnown RBP23.8■■□□□ 1.4
HOXA4-201ENST00000360046 CAPN2P17655 700 aa23.8■■□□□ 1.4
HOXA4-201ENST00000360046 CYP24A1Q07973 514 aa23.8■■□□□ 1.4
HOXA4-201ENST00000360046 AGPAT5Q9NUQ2 364 aa23.8■■□□□ 1.4
HOXA4-201ENST00000360046 PIN4Q9Y237 131 aaKnown RBP23.8■■□□□ 1.4
HOXA4-201ENST00000360046 A0A1B0GUA9 196 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 CAND2O75155 1236 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 EN2P19622 333 aaPredicted RBP23.79■■□□□ 1.4
HOXA4-201ENST00000360046 TRIM60Q495X7 471 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 NOTUMQ6P988 496 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 THNSL1Q8IYQ7 743 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 CCDC127Q96BQ5 260 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 MMRN2Q9H8L6 949 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 RBAKQ9NYW8 714 aaPredicted RBP23.79■■□□□ 1.4
HOXA4-201ENST00000360046 ATP11BQ9Y2G3 1177 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 DCDC2CA8MYV0 355 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 RPS6KA5O75582 802 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 PTMAP06454 111 aaKnown RBP23.79■■□□□ 1.4
HOXA4-201ENST00000360046 MCF2P10911 925 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 HOXA11P31270 313 aaPredicted RBP23.79■■□□□ 1.4
HOXA4-201ENST00000360046 DLG4P78352 724 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 ZNF618Q5T7W0 954 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 SPECC1LQ69YQ0 1117 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 CRELD2Q6UXH1 353 aaPredicted RBP23.79■■□□□ 1.4
HOXA4-201ENST00000360046 FAM228AQ86W67 206 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 MFSD14AQ96MC6 490 aa23.79■■□□□ 1.4
HOXA4-201ENST00000360046 FAM189A1O60320 539 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 CD4P01730 458 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 CKBP12277 381 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 AXLP30530 894 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 TNFSF9P41273 254 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 OSTNP61366 133 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 TLE2Q04725 743 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 APBB1IPQ7Z5R6 666 aaPredicted RBP23.78■■□□□ 1.4
HOXA4-201ENST00000360046 USP37Q86T82 979 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 CCDC155Q8N6L0 562 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 PLEKHO2Q8TD55 490 aa23.78■■□□□ 1.4
HOXA4-201ENST00000360046 PCMTD1Q96MG8 357 aaPredicted RBP23.78■■□□□ 1.4
HOXA4-201ENST00000360046 RBAK-RBAKDNI3L0D1 243 aa23.77■■□□□ 1.4
HOXA4-201ENST00000360046 DLATP10515 647 aaKnown RBP23.77■■□□□ 1.4
HOXA4-201ENST00000360046 PBX1P40424 430 aa23.77■■□□□ 1.4
HOXA4-201ENST00000360046 SYCP1Q15431 976 aa23.77■■□□□ 1.4
HOXA4-201ENST00000360046 SLC27A1Q6PCB7 646 aa23.77■■□□□ 1.4
HOXA4-201ENST00000360046 CEP120Q8N960 986 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms