RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 NOLC1Q14978 699 aaKnown RBP eCLIP27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 PTPN21Q16825 1174 aa27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 TRIM71Q2Q1W2 868 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 EEF1DP3Q658K8 133 aa27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 CRELD2Q6UXH1 353 aaPredicted RBP27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 DHX38Q92620 1227 aaKnown RBP27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 FAM213AQ9BRX8 229 aa27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 CDY2AQ9Y6F7 541 aa27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 ANK1P16157 1881 aa27.09■■□□□ 1.93
SHARPIN-201ENST00000359551 ZNF233A6NK53 670 aa27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 M0QZ92 97 aa27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 AFPP02771 609 aaKnown RBP27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 DCAF17Q5H9S7 520 aaPredicted RBP27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 U2AF1L4Q8WU68 220 aaKnown RBP27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 TCHPQ9BT92 498 aa27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 PDZD7Q9H5P4 517 aa27.08■■□□□ 1.93
SHARPIN-201ENST00000359551 A0A1B0GUA9 196 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 GOLGA6L6A8MZA4 724 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 OGTO15294 1046 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 CAND2O75155 1236 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 SFPQP23246 707 aaKnown RBP eCLIP27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 MATR3P43243 847 aaKnown RBP eCLIP27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 MNX1P50219 401 aaPredicted RBP27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 VAMP7P51809 220 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 CYP24A1Q07973 514 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 TBX2Q13207 712 aaPredicted RBP27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 ZNF568Q3ZCX4 644 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 PLEKHO2Q8TD55 490 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 TMC2Q8TDI7 906 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 SENP6Q9GZR1 1112 aaPredicted RBP27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 CDT1Q9H211 546 aa27.08■■□□□ 1.92
SHARPIN-201ENST00000359551 TCERG1LQ5VWI1 586 aa27.07■■□□□ 1.92
SHARPIN-201ENST00000359551 CATSPER4Q7RTX7 472 aa27.07■■□□□ 1.92
SHARPIN-201ENST00000359551 NOD1Q9Y239 953 aa27.07■■□□□ 1.92
SHARPIN-201ENST00000359551 B4GALT4O60513 344 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 CHRNA1P02708 482 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 MCF2P10911 925 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 FGFR4P22455 802 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 AXLP30530 894 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 HOXA11P31270 313 aaPredicted RBP27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 ACOT2P49753 483 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 TMEM132AQ24JP5 1023 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 FAM26DQ5JW98 314 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 C1orf220Q5T0J3 134 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 ZBTB33Q86T24 672 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 PARD3BQ8TEW8 1205 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 CPB2Q96IY4 423 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 SIK3Q9Y2K2 1263 aa27.06■■□□□ 1.92
SHARPIN-201ENST00000359551 SYCP1Q15431 976 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 ZBTB41Q5SVQ8 909 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 TRPV6Q9H1D0 765 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 AGPAT5Q9NUQ2 364 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 TRIM49P0CI25 452 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 TRIM49CP0CI26 452 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 THPOP40225 353 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 DLG4P78352 724 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 NCBP1Q09161 790 aaKnown RBP27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 PSMD6Q15008 389 aa27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 CPSF3Q9UKF6 684 aaKnown RBP27.05■■□□□ 1.92
SHARPIN-201ENST00000359551 BRCA2P51587 3418 aa27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 GTPBP10A4D1E9 387 aaKnown RBP27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 HARSP12081 509 aaKnown RBP27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 FMO5P49326 533 aa27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 USP37Q86T82 979 aa27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 CDR2LQ86X02 465 aaPredicted RBP27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 CCDC155Q8N6L0 562 aa27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP27.04■■□□□ 1.927e-7■□□□□ 9.8
SHARPIN-201ENST00000359551 CITO14578 2027 aa27.04■■□□□ 1.92
SHARPIN-201ENST00000359551 PMM2O15305 246 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 TFRCP02786 760 aaKnown RBP27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 GJA8P48165 433 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 CLDN10P78369 228 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 POU5F1Q01860 360 aaKnown RBP27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 RBL2Q08999 1139 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 KCNMA1Q12791 1236 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 NOTUMQ6P988 496 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 FAM228AQ86W67 206 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 BRSK2Q8IWQ3 736 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 FAM126BQ8IXS8 530 aa27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 RBAKQ9NYW8 714 aaPredicted RBP27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 NOC2LQ9Y3T9 749 aaKnown RBP27.03■■□□□ 1.92
SHARPIN-201ENST00000359551 PTMAP06454 111 aaKnown RBP27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 CTSHP09668 335 aa27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 KYAT1Q16773 422 aa27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 CCDC186Q7Z3E2 898 aa27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 ANKLE1Q8NAG6 615 aa27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 DNAH12Q6ZR08 3092 aa27.02■■□□□ 1.92
SHARPIN-201ENST00000359551 LRRIQ3A6PVS8 624 aaPredicted RBP27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 STX10O60499 249 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 CD4P01730 458 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 TNFSF9P41273 254 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 GSDMDP57764 484 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 PPP3CAQ08209 521 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 TRIM14Q14142 442 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 DCAF4L1Q3SXM0 396 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 FIGNQ5HY92 759 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 SLC27A1Q6PCB7 646 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 ADPGKQ9BRR6 497 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 RALGAPA2Q2PPJ7 1873 aa27.01■■□□□ 1.92
SHARPIN-201ENST00000359551 P4HA2O15460 535 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms