RNA–Protein interactions for RNA: ENST00000358543.8

ALKAL1-201, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALKAL1, Length 1,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-201ENST00000358543 AGMOQ6ZNB7 445 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 ZBTB45Q96K62 511 aaPredicted RBP26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 GSDMAQ96QA5 445 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 CDT1Q9H211 546 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 SLC39A2Q9NP94 309 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 STYXL1Q9Y6J8 313 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 COL4A6Q14031 1691 aa26.6■■□□□ 1.85
ALKAL1-201ENST00000358543 BMT2Q1RMZ1 405 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 CLLU1OSQ5K130 101 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 SLFN12LQ6IEE8 588 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 GPR153Q6NV75 609 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 ABI1Q8IZP0 508 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 GLIS3Q8NEA6 775 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 SCFD1Q8WVM8 642 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 LPPQ93052 612 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 TIFAQ96CG3 184 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 CASD1Q96PB1 797 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 RNF39Q9H2S5 420 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 NXF3Q9H4D5 531 aaKnown RBP26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 RMND1Q9NWS8 449 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 GIT1Q9Y2X7 761 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 HES2Q9Y543 173 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 GBF1Q92538 1859 aa26.59■■□□□ 1.85
ALKAL1-201ENST00000358543 ZMYM2Q9UBW7 1377 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 TMEM265A0A087WTH1 108 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 MEIS3P2A8K0S8 358 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 OFD1O75665 1012 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 CA3P07451 260 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 NOLC1Q14978 699 aaKnown RBP eCLIP26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 SLC39A4Q6P5W5 647 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 KIAA0895Q8NCT3 520 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 RSAD1Q9HA92 442 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 ANKFY1Q9P2R3 1169 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 PCDHA5Q9Y5H7 936 aa26.58■■□□□ 1.85
ALKAL1-201ENST00000358543 LCHNA4D1U4 455 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 ANKRD63C9JTQ0 380 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 INPPL1O15357 1258 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 GRM5P41594 1212 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 GATMP50440 423 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 BTG3Q14201 252 aaPredicted RBP26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 GLB1LQ6UWU2 654 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 ZBTB33Q86T24 672 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 SYCP3Q8IZU3 236 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 SMARCE1Q969G3 411 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 NKX2-4Q9H2Z4 354 aa26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 FNDC1Q4ZHG4 1894 aaPredicted RBP26.57■■□□□ 1.84
ALKAL1-201ENST00000358543 A0A0B4J269 797 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 TBKBP1A7MCY6 615 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 HOXD13P35453 343 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 SNRPFP62306 86 aaKnown RBP26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 KYAT1Q16773 422 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 FIBCD1Q8N539 461 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 HELQQ8TDG4 1101 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 MRPL9Q9BYD2 267 aaKnown RBP26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 GTPBP4Q9BZE4 634 aaKnown RBP26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 HAPLN2Q9GZV7 340 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 SLC28A3Q9HAS3 691 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 SNTG2Q9NY99 539 aa26.56■■□□□ 1.84
ALKAL1-201ENST00000358543 AKAP5P24588 427 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 MCM4P33991 863 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 MATR3P43243 847 aaKnown RBP eCLIP26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 LRCH3Q96II8 777 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 CCDC94Q9BW85 323 aaPredicted RBP26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 APOL6Q9BWW8 343 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 GBP3Q9H0R5 595 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 KANSL3Q9P2N6 904 aa26.55■■□□□ 1.84
ALKAL1-201ENST00000358543 LINC01553A4QN01 128 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 KIF20AO95235 890 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 GARTP22102 1010 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 ADSSP30520 456 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 TAP1Q03518 808 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 NOMO2Q5JPE7 1267 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 CLP1Q92989 425 aaKnown RBP26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 PARP2Q9UGN5 583 aa26.54■■□□□ 1.84
ALKAL1-201ENST00000358543 ARL5CA6NH57 179 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 FAM189A1O60320 539 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 FXR1P51114 621 aaKnown RBP eCLIP26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 KNOP1Q1ED39 458 aaKnown RBP26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 PAN2Q504Q3 1202 aaKnown RBP26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 PPP2R2DQ66LE6 453 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 THNSL1Q8IYQ7 743 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 LRRC43Q8N309 656 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 CEP120Q8N960 986 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 URGCPQ8TCY9 931 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 GPT2Q8TD30 523 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 ERCC4Q92889 916 aaPredicted RBP26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 ACAP3Q96P50 834 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 GAD1Q99259 594 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 MSTO1Q9BUK6 570 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 IKZF4Q9H2S9 585 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 CLSTN2Q9H4D0 955 aa26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 CGNQ9P2M7 1197 aaKnown RBP26.53■■□□□ 1.84
ALKAL1-201ENST00000358543 TISP43B9A030 160 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 OGTO15294 1046 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 RECQL4O94761 1208 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 ARHGEF15O94989 841 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 ZNF658Q5TYW1 1059 aaPredicted RBP26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 LRRC55Q6ZSA7 311 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 POMGNT1Q8WZA1 660 aa26.52■■□□□ 1.84
ALKAL1-201ENST00000358543 SAMD11Q96NU1 681 aa26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms