RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 ARHGAP27Q6ZUM4 889 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 VPS52Q8N1B4 723 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 XXYLT1Q8NBI6 393 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 SPIRE2Q8WWL2 714 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 CCT6BQ92526 530 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 GPRC5CQ9NQ84 441 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 PI4KBQ9UBF8 816 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 AGTPBP1Q9UPW5 1226 aa7.03□□□□□ -1.28
CSDE1-203ENST00000358528 ZNF142P52746 1687 aaPredicted RBP7.03□□□□□ -1.28
CSDE1-203ENST00000358528 HNRNPDLO14979 420 aaKnown RBP7.02□□□□□ -1.28
CSDE1-203ENST00000358528 PPFIA2O75334 1257 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 PRKCIP41743 596 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 STAT2P52630 851 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 RAD23BP54727 409 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 DDR1Q08345 913 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 STRN3Q13033 797 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 NAIF1Q69YI7 327 aaPredicted RBP7.02□□□□□ -1.28
CSDE1-203ENST00000358528 P3H4Q92791 437 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 ACSF2Q96CM8 615 aaPredicted RBP7.02□□□□□ -1.28
CSDE1-203ENST00000358528 TMEM237Q96Q45 408 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 ACCSQ96QU6 501 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 SMC6Q96SB8 1091 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 KLF6Q99612 283 aaPredicted RBP7.02□□□□□ -1.28
CSDE1-203ENST00000358528 IQCGQ9H095 443 aaKnown RBP7.02□□□□□ -1.28
CSDE1-203ENST00000358528 ARHGEF10LQ9HCE6 1279 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 ARL2BPQ9Y2Y0 163 aa7.02□□□□□ -1.28
CSDE1-203ENST00000358528 PARP4Q9UKK3 1724 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 A0A0G2JND7 137 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 CFAP73A6NFT4 308 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 IPO5O00410 1097 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 RTN2O75298 545 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 EIF2AK2P19525 551 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 MSH2P43246 934 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 COPS2P61201 443 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 AUHQ13825 339 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 ZNF394Q53GI3 561 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 DCAF12L1Q5VU92 463 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 IZUMO3Q5VZ72 239 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 TTC27Q6P3X3 843 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 ANKMY2Q8IV38 441 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 LMNTD2Q8IXW0 634 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 SCYL3Q8IZE3 742 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 ANKRD35Q8N283 1001 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 RAB3IPQ96QF0 476 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM117Q9H0C3 514 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 WNT8AQ9H1J5 351 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 TOPORSQ9NS56 1045 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 DONSONQ9NYP3 566 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 HAO1Q9UJM8 370 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 A0A0A6YYK5 440 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 DDTLA6NHG4 134 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 SGK1O00141 431 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 MEIS2O14770 477 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 DDX3YO15523 660 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 BBOX1O75936 387 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 PLS3P13797 630 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 SARNPP82979 210 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 RASA3Q14644 834 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 GNPTABQ3T906 1256 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 FYB2Q5VWT5 728 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 CAPRIN2Q6IMN6 1127 aaKnown RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 LLGL2Q6P1M3 1020 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 C6orf89Q6UWU4 347 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 COL23A1Q86Y22 540 aaPredicted RBP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 GRK7Q8WTQ7 553 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 SLC5A5Q92911 643 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 MIEF2Q96C03 454 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 KCNMB3Q9NPA1 279 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 CHST7Q9NS84 486 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 C1orf112Q9NSG2 853 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSDE1-203ENST00000358528 MCM8Q9UJA3 840 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 TMEM59LQ9UK28 342 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 USP20Q9Y2K6 914 aa7.02□□□□□ -1.29
CSDE1-203ENST00000358528 CES2O00748 559 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ARP10275 920 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 RARGP13631 454 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ATP2A2P16615 1042 aaKnown RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 HOXA7P31268 230 aaPredicted RBP7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CHKAP35790 457 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ECE1P42892 770 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 NT5C2P49902 561 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 CNGA2Q16280 664 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 LIN9Q5TKA1 542 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 EXOC3L1Q86VI1 746 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 ERICH1Q86X53 443 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 STMN2Q93045 179 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SNF8Q96H20 258 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 LRRC37BQ96QE4 947 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SYNCQ9H7C4 482 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SIX2Q9NPC8 291 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 KCNQ5Q9NR82 932 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 HSPBP1Q9NZL4 362 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 PCDHA2Q9Y5H9 948 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 STK24Q9Y6E0 443 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 DCCP43146 1447 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SNX3O60493 162 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 SMIM24O75264 130 aa7.01□□□□□ -1.29
CSDE1-203ENST00000358528 KRT16P08779 473 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms