RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 LNX1Q8TBB1 728 aaPredicted RBP15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 U2AF1L4Q8WU68 220 aaKnown RBP15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 ZNF333Q96JL9 665 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 MMP19Q99542 508 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 TSPYL1Q9H0U9 437 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 ST6GALNAC4Q9H4F1 302 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 TCEAL9Q9UHQ7 104 aa15.47■□□□□ 0.07
NIPAL3-203ENST00000358028 A6NNZ2 444 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 TULP2O00295 520 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 CCNE2O96020 404 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 CCND2P30279 289 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 GRK4P32298 578 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 RGS2P41220 211 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 NOP2P46087 812 aaKnown RBP15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 DNA2P51530 1060 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 NPEPPSP55786 919 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 GTF2BQ00403 316 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 CCL14Q16627 93 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 TUBB8Q3ZCM7 444 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 INTS8Q75QN2 995 aaKnown RBP15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 MREGQ8N565 214 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 RDH13Q8NBN7 331 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 SLC30A5Q8TAD4 765 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 OLIG1Q8TAK6 271 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 NPLOC4Q8TAT6 608 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 TRIB2Q92519 343 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 APBA2Q99767 749 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 GPR88Q9GZN0 384 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 PCIF1Q9H4Z3 704 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 ANKEF1Q9NU02 776 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 APEX2Q9UBZ4 518 aa15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 PACSIN2Q9UNF0 486 aaPredicted RBP15.46■□□□□ 0.07
NIPAL3-203ENST00000358028 FRMPD3Q5JV73 1810 aa15.46■□□□□ 0.06
NIPAL3-203ENST00000358028 TMEM150BA6NC51 233 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 GOLGA6CA6NDK9 693 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 STRNO43815 780 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 SHOX2O60902 331 aaPredicted RBP15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 HSF2BPO75031 334 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 GOLGA6DP0CG33 693 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 RFX1P22670 979 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 SNRPFP62306 86 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 BAATQ14032 418 aaPredicted RBP15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 XKR9Q5GH70 373 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 HAUS6Q7Z4H7 955 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 DNAAF5Q86Y56 855 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 SYCE1Q8N0S2 351 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 ABRAQ8N0Z2 381 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 LRRC57Q8N9N7 239 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 USP38Q8NB14 1042 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 SLAIN1Q8ND83 568 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 RDM1Q8NG50 284 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 CALR3Q96L12 384 aaKnown RBP15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 GOLGA6AQ9NYA3 693 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 TMEM59LQ9UK28 342 aa15.45■□□□□ 0.06
NIPAL3-203ENST00000358028 TISP43B9A030 160 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 KIF4AO95239 1232 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 MYCP01106 439 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 PGK2P07205 417 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 CCDC172P0C7W6 258 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 VAMP7P51809 220 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 KCTD2Q14681 263 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 XXYLT1Q8NBI6 393 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SLC17A8Q8NDX2 589 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 CHST13Q8NET6 341 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 TPCN2Q8NHX9 752 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 LMO3Q8TAP4 145 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 ACTRT1Q8TDG2 376 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 PXYLP1Q8TE99 480 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 WHAMMQ8TF30 809 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 GPRASP2Q96D09 838 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 GDAP1L1Q96MZ0 367 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 IWS1Q96ST2 819 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SENP7Q9BQF6 1050 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SH2D3AQ9BRG2 576 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 CBWD1Q9BRT8 395 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SYT11Q9BT88 431 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 ACAD9Q9H845 621 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 HSPBP1Q9NZL4 362 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 FLRT1Q9NZU1 646 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 EMSYQ7Z589 1322 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 ARID2Q68CP9 1835 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 LRRC37A2A6NM11 1700 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 MAPK13O15264 365 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SLC16A4O15374 487 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 P4HA2O15460 535 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 HEXIM1O94992 359 aaKnown RBP15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 HOXC6P09630 235 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 PEX3P56589 373 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 DLG4P78352 724 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 TRIM32Q13049 653 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 PLA2G4FQ68DD2 849 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 ZNF746Q6NUN9 644 aaPredicted RBP15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 SLFN11Q7Z7L1 901 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 DPP9Q86TI2 863 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 NLRX1Q86UT6 975 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 VSIG10LQ86VR7 867 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 RUFY1Q96T51 708 aa15.44■□□□□ 0.06
NIPAL3-203ENST00000358028 GPRC5CQ9NQ84 441 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms