RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 PPCSQ9HAB8 311 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 TEKT2Q9UIF3 430 aa15.72■□□□□ 0.11
CHD4-201ENST00000357008 SCP2P22307 547 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 IRX1P78414 480 aaPredicted RBP15.71■□□□□ 0.11
CHD4-201ENST00000357008 TEX9Q8N6V9 391 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 GGT7Q9UJ14 662 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 HNRNPCL2B2RXH8 293 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 SYF2O95926 243 aaKnown RBP15.71■□□□□ 0.11
CHD4-201ENST00000357008 NEK2P51955 445 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 SNX19Q92543 992 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 DACH2Q96NX9 599 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 UVRAGQ9P2Y5 699 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 PNPLA7Q6ZV29 1317 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 ARPP19P56211 112 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 TRPM8Q7Z2W7 1104 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 LONP2Q86WA8 852 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 RNF217Q8TC41 542 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 HNRNPLLQ8WVV9 542 aaKnown RBP15.71■□□□□ 0.11
CHD4-201ENST00000357008 ASPSCR1Q9BZE9 553 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 ABCF3Q9NUQ8 709 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 FEM1BQ9UK73 627 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 RHOBTB3O94955 611 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 HNRNPCP07910 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
CHD4-201ENST00000357008 NFKBIAP25963 317 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 ATICP31939 592 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 STK33Q9BYT3 514 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 CXorf56Q9H5V9 222 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
CHD4-201ENST00000357008 ABCB11O95342 1321 aa15.71■□□□□ 0.1
CHD4-201ENST00000357008 ZNF189O75820 626 aaPredicted RBP15.71■□□□□ 0.1
CHD4-201ENST00000357008 IMPG1Q17R60 797 aa15.71■□□□□ 0.1
CHD4-201ENST00000357008 SLC44A5Q8NCS7 719 aa15.71■□□□□ 0.1
CHD4-201ENST00000357008 OR9Q1Q8NGQ5 310 aa15.71■□□□□ 0.1
CHD4-201ENST00000357008 RIN2Q8WYP3 895 aaPredicted RBP15.71■□□□□ 0.1
CHD4-201ENST00000357008 MTRQ99707 1265 aa15.71■□□□□ 0.1
CHD4-201ENST00000357008 ARHGEF9O43307 516 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 KCNA4P22459 653 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 GUCY1A2P33402 732 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 STAT3P40763 770 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 PHKA2P46019 1235 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 KDSRQ06136 332 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 STXBP2Q15833 593 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 KIAA1841Q6NSI8 718 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 SLC35G2Q8TBE7 412 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 RAPGEF5Q92565 580 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 IFT43Q96FT9 208 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 EIF2AK1Q9BQI3 630 aaKnown RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 TRIM51Q9BSJ1 452 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 RBM12Q9NTZ6 932 aaKnown RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 LRFN2Q9ULH4 789 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 BAG6P46379 1132 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 AP3M2P53677 418 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 CNGA3Q16281 694 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 GPD1LQ8N335 351 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 ARL8AQ96BM9 186 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 ULK4Q96C45 1275 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 TSSK1BQ9BXA7 367 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 CEP170Q5SW79 1584 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 UGGT1Q9NYU2 1555 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 USP42Q9H9J4 1324 aaKnown RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 MED14O60244 1454 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 EYA4O95677 639 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 NBPF20Q3BBV1 942 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 LRRC8EQ6NSJ5 796 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 C7orf25Q9BPX7 421 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 LXNQ9BS40 222 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 AGPAT5Q9NUQ2 364 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 HUS1O60921 280 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 ENO1P06733 434 aaKnown RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 GALCP54803 685 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 NAF1Q96HR8 494 aaKnown RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 C2orf40Q9H1Z8 148 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 PSMC5P62195 406 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 QRICH1Q2TAL8 776 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 SLC30A9Q6PML9 568 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 RCOR2Q8IZ40 523 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 CYFIP2Q96F07 1278 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 RBM15Q96T37 977 aaKnown RBP eCLIP15.7■□□□□ 0.14e-7■■■■□ 23.8
CHD4-201ENST00000357008 ROPN1BQ9BZX4 212 aaPredicted RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 ROPN1Q9HAT0 212 aaPredicted RBP15.7■□□□□ 0.1
CHD4-201ENST00000357008 CPDO75976 1380 aa15.7■□□□□ 0.1
CHD4-201ENST00000357008 FAM47DPA6NHR8 397 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 CDH6P55285 790 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ADGRF4Q8IZF3 695 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 FOXP3Q9BZS1 431 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ALG13Q9NP73 1137 aaKnown RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.69■□□□□ 0.18e-12■■■□□ 17
CHD4-201ENST00000357008 FAM107AO95990 144 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 ALDH18A1P54886 795 aaKnown RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 FAM102AQ5T9C2 384 aaPredicted RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 LRRC31Q6UY01 552 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 MMGT1Q8N4V1 131 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 DTX3LQ8TDB6 740 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 RAD17O75943 681 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 NYAP1Q6ZVC0 841 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 CYP26A1O43174 497 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 FASTKD1Q53R41 847 aaKnown RBP15.69■□□□□ 0.1
CHD4-201ENST00000357008 EFHC2Q5JST6 749 aa15.69■□□□□ 0.1
CHD4-201ENST00000357008 MTHFD1LQ6UB35 978 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms