RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 HPS3Q969F9 1004 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 FGFBP2Q9BYJ0 223 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 CDT1Q9H211 546 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 TOPORSQ9NS56 1045 aaPredicted RBP17.49■□□□□ 0.39
FDPS-201ENST00000356657 ANKFY1Q9P2R3 1169 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 IPPQ9Y573 584 aa17.49■□□□□ 0.39
FDPS-201ENST00000356657 A0A0B4J269 797 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 TTLL13PA6NNM8 815 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 SOX1O00570 391 aaPredicted RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 PDXKO00764 312 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 ABLIM1O14639 778 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 GRM5P41594 1212 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 DEFB103AP81534 67 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 MYBPC2Q14324 1141 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.48■□□□□ 0.393e-10■■■■□ 21.1
FDPS-201ENST00000356657 C12orf56Q8IXR9 622 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 LRCH3Q96II8 777 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 CCDC94Q9BW85 323 aaPredicted RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 TYW1Q9NV66 732 aaKnown RBP17.48■□□□□ 0.39
FDPS-201ENST00000356657 MAN1B1Q9UKM7 699 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 GIT1Q9Y2X7 761 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 INSL6Q9Y581 213 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 RALGAPA2Q2PPJ7 1873 aa17.48■□□□□ 0.39
FDPS-201ENST00000356657 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 PSMA7O14818 248 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 OGTO15294 1046 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 INPPL1O15357 1258 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 LETM1O95202 739 aaPredicted RBP17.47■□□□□ 0.39
FDPS-201ENST00000356657 NPTXRO95502 500 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 ITGA4P13612 1032 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 MATR3P43243 847 aaKnown RBP eCLIP17.47■□□□□ 0.39
FDPS-201ENST00000356657 HTRA4P83105 476 aaPredicted RBP17.47■□□□□ 0.39
FDPS-201ENST00000356657 EEF1DP3Q658K8 133 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 GLB1LQ6UWU2 654 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 ABI1Q8IZP0 508 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 GLIS3Q8NEA6 775 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 POMGNT1Q8WZA1 660 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 TSPAN18Q96SJ8 248 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 RAD9AQ99638 391 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 MSTO1Q9BUK6 570 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 MRPL9Q9BYD2 267 aaKnown RBP17.47■□□□□ 0.39
FDPS-201ENST00000356657 KIAA1586Q9HCI6 787 aa17.47■□□□□ 0.39
FDPS-201ENST00000356657 FNDC1Q4ZHG4 1894 aaPredicted RBP17.47■□□□□ 0.39
FDPS-201ENST00000356657 DGKIO75912 1065 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 CLTAP09496 248 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 ATF7P17544 494 aaPredicted RBP17.46■□□□□ 0.39
FDPS-201ENST00000356657 HOXD13P35453 343 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 YARSP54577 528 aaKnown RBP17.46■□□□□ 0.39
FDPS-201ENST00000356657 KCNA1Q09470 495 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 RAB30Q15771 203 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 NFIL3Q16649 462 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 CT47A1Q5JQC4 288 aaPredicted RBP17.46■□□□□ 0.39
FDPS-201ENST00000356657 ARMCX5Q6P1M9 558 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 SLC39A4Q6P5W5 647 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 MLKLQ8NB16 471 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 SMG8Q8ND04 991 aaKnown RBP17.46■□□□□ 0.39
FDPS-201ENST00000356657 DHTKD1Q96HY7 919 aaPredicted RBP17.46■□□□□ 0.39
FDPS-201ENST00000356657 ZBED2Q9BTP6 218 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 TMEM117Q9H0C3 514 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 RSAD1Q9HA92 442 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 AGPAT3Q9NRZ7 376 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 KANSL3Q9P2N6 904 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 DACH1Q9UI36 760 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 TRAF3IP3Q9Y228 551 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 GDAQ9Y2T3 454 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 PCDHA11Q9Y5I1 949 aa17.46■□□□□ 0.39
FDPS-201ENST00000356657 CALUO43852 315 aaPredicted RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 SMAD3P84022 425 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 LRRC63Q05C16 580 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 EDRF1Q3B7T1 1238 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 SLC9A9Q8IVB4 645 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 CMTR2Q8IYT2 770 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 ADSSL1Q8N142 457 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 ERCC4Q92889 916 aaPredicted RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 YME1L1Q96TA2 773 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 KCTD10Q9H3F6 313 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 NXF3Q9H4D5 531 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 PLEKHA5Q9HAU0 1116 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 RC3H2Q9HBD1 1191 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 AGO2Q9UKV8 859 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 GBF1Q92538 1859 aa17.45■□□□□ 0.38
FDPS-201ENST00000356657 TDRD15B5MCY1 1934 aaKnown RBP17.45■□□□□ 0.38
FDPS-201ENST00000356657 TGFB1I1O43294 461 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 TLL1O43897 1013 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 RPL13P26373 211 aaKnown RBP17.44■□□□□ 0.38
FDPS-201ENST00000356657 ADSSP30520 456 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 CDR2LQ86X02 465 aaPredicted RBP17.44■□□□□ 0.38
FDPS-201ENST00000356657 CD302Q8IX05 232 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 NELFCDQ8IXH7 590 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 URGCPQ8TCY9 931 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 ZNF689Q96CS4 500 aaPredicted RBP17.44■□□□□ 0.38
FDPS-201ENST00000356657 ACAP3Q96P50 834 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 TSG101Q99816 390 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 BICDL2A1A5D9 508 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 ANKRD63C9JTQ0 380 aa17.44■□□□□ 0.38
FDPS-201ENST00000356657 FAM189A1O60320 539 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms