RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 SLC16A4O15374 487 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GPD1LQ8N335 351 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PHF21AQ96BD5 680 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 DNAJC7Q99615 494 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ING2Q9H160 280 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 NARFQ9UHQ1 456 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 RAB21Q9UL25 225 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MROH7-TTC4A0A0A0MT08 1334 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GLI2P10070 1586 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SYNDIG1LA6NDD5 238 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 FGGP02679 453 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SLCO1A2P46721 670 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MMP14P50281 582 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ZNF157P51786 506 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 BLVRAP53004 296 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 E2F5Q15329 346 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 FAM182BQ5T319 152 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 C6orf118Q5T5N4 469 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ADCK2Q7Z695 626 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ATPAF2Q8N5M1 289 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ENGASEQ8NFI3 743 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 NDST4Q9H3R1 872 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SNX5Q9Y5X3 404 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GOLGA8TH3BQL2 631 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PSMC1P62191 440 aaKnown RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PDCLQ13371 301 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 WDR75Q8IWA0 830 aaKnown RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PROM2Q8N271 834 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MORC4Q8TE76 937 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 KIF12Q96FN5 646 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 FMO2Q99518 471 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 FAM213AQ9BRX8 229 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 FUT8Q9BYC5 575 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GABBR1Q9UBS5 961 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 IPPQ9Y573 584 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ZSCAN9O15535 394 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ALS2CLQ60I27 953 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 KCTD16Q68DU8 428 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 UNC13DQ70J99 1090 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SFR1Q86XK3 245 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 DDIASQ8IXT1 998 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CCNYL1Q8N7R7 359 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 NUP85Q9BW27 656 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PARD6BQ9BYG5 372 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 DNAJC12Q9UKB3 198 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CFAP99D6REC4 459 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MAP2K7O14733 419 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 LTKP29376 864 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 TPI1P60174 286 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 TRIM72Q6ZMU5 477 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 KLHL29Q96CT2 875 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PAGE5Q96GU1 130 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 JPH1Q9HDC5 661 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ZSCAN32Q9NX65 697 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 BFARQ9NZS9 450 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SCOCQ9UIL1 159 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ANAPC7Q9UJX3 599 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 KDM6AO15550 1401 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CCDC195A0A1B0GUA6 201 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PIK3R2O00459 728 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CTNND1O60716 968 aaKnown RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ALDH1A2O94788 518 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SERPIND1P05546 499 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 ESRRAP11474 423 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 SKIP12755 728 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 USP6P35125 1406 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 EFTUD2Q15029 972 aaKnown RBP eCLIP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 STILQ15468 1287 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 BCAS4Q8TDM0 211 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 GPR101Q96P66 508 aaPredicted RBP5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PANX2Q96RD6 677 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 MUC3BQ9H195 1237 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 PDE11AQ9HCR9 933 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 HEY1Q9Y5J3 304 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 CD163L1Q9NR16 1453 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 IGSF1Q8N6C5 1336 aa5.86□□□□□ -1.47
PTPRD-202ENST00000356435 UBA6A0AVT1 1052 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-202ENST00000356435 RARBP10826 455 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 OCA2Q04671 838 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 KIRREL3Q8IZU9 778 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 RAPGEF5Q92565 580 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 TSPAN17Q96FV3 270 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 BTBD6Q96KE9 485 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 VPS11Q9H270 941 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 RPAP3Q9H6T3 665 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-202ENST00000356435 AIPL1Q9NZN9 384 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 CNOT8Q9UFF9 292 aaKnown RBP5.85□□□□□ -1.47
PTPRD-202ENST00000356435 TUBE1Q9UJT0 475 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 MAN1B1Q9UKM7 699 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 ERBB3P21860 1342 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 PODXLO00592 558 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 ENC1O14682 589 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 IFNAR1P17181 557 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 AARSP49588 968 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRD-202ENST00000356435 KRT17Q04695 432 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 IER5Q5VY09 327 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 TRIM48Q8IWZ4 208 aa5.85□□□□□ -1.47
PTPRD-202ENST00000356435 ST13P4Q8IZP2 240 aaPredicted RBP5.85□□□□□ -1.47
PTPRD-202ENST00000356435 FAM20AQ96MK3 541 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms