RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 LLGL2Q6P1M3 1020 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 THNSL1Q8IYQ7 743 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 SLC30A5Q8TAD4 765 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 ARHGEF26Q96DR7 871 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 IQCDQ96DY2 449 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 OSBPL9Q96SU4 736 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 MSTO1Q9BUK6 570 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 TLR10Q9BXR5 811 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 STK33Q9BYT3 514 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 EDEM3Q9BZQ6 932 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 INO80BQ9C086 356 aaPredicted RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 NUCKS1Q9H1E3 243 aaKnown RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 DHX33Q9H6R0 707 aaKnown RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 AGO2Q9UKV8 859 aaKnown RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 IVNS1ABPQ9Y6Y0 642 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 GRID2IPA4D2P6 1211 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 TNFAIP3P21580 790 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 CYP24A1Q07973 514 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 CCDC181Q5TID7 509 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 PNMA8AQ86V59 439 aaPredicted RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 CPNE8Q86YQ8 564 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 SLC9A9Q8IVB4 645 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 RPUSD2Q8IZ73 545 aaKnown RBP19.06■□□□□ 0.64
NPAS3-202ENST00000356141 GPD1LQ8N335 351 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 AFG1LQ8WV93 481 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 BTBD6Q96KE9 485 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 THAP2Q9H0W7 228 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 NRBP2Q9NSY0 501 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 ARHGAP28Q9P2N2 729 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 STAM2O75886 525 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 LCA5LO95447 670 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 FNBP1Q96RU3 617 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 SNX12Q9UMY4 172 aa19.06■□□□□ 0.64
NPAS3-202ENST00000356141 DKC1O60832 514 aaKnown RBP eCLIP19.05■□□□□ 0.64
NPAS3-202ENST00000356141 ATG7O95352 703 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 VTNP04004 478 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 H2AFXP16104 143 aaPredicted RBP19.05■□□□□ 0.64
NPAS3-202ENST00000356141 FGFR4P22455 802 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 CETN1Q12798 172 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 FAM160B1Q5W0V3 765 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 TMCO3Q6UWJ1 677 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 MMEP08473 750 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 HUNKP57058 714 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 PLCB4Q15147 1175 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 ZNF394Q53GI3 561 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 NAA35Q5VZE5 725 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 OR5B17Q8NGF7 314 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 SYN2Q92777 582 aaPredicted RBP19.05■□□□□ 0.64
NPAS3-202ENST00000356141 JRKLQ9Y4A0 524 aa19.05■□□□□ 0.64
NPAS3-202ENST00000356141 UMODL1Q5DID0 1318 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 MYCNP04198 464 aaPredicted RBP19.04■□□□□ 0.64
NPAS3-202ENST00000356141 NAB2Q15742 525 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 PAPD7Q5XG87 772 aaKnown RBP19.04■□□□□ 0.64
NPAS3-202ENST00000356141 PASD1Q8IV76 773 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 RBAKQ9NYW8 714 aaPredicted RBP19.04■□□□□ 0.64
NPAS3-202ENST00000356141 KCNK3O14649 394 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 LAMTOR4Q0VGL1 99 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 ALCAMQ13740 583 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 WHAMMP3Q1A5X7 153 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 DAAM2Q86T65 1068 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 MINDY3Q9H8M7 445 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 EVPLQ92817 2033 aa19.04■□□□□ 0.64
NPAS3-202ENST00000356141 LAMA3Q16787 3333 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 DNAJC25-GNG10A0A024R161 153 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 ZNF233A6NK53 670 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 SASH3O75995 380 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 FERP16591 822 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 KRT39Q6A163 491 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 EFCAB12Q6NXP0 572 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 CREG2Q8IUH2 290 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 TMEM192Q8IY95 271 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 SUCLA2Q9P2R7 463 aaPredicted RBP19.03■□□□□ 0.64
NPAS3-202ENST00000356141 ZBTB42B2RXF5 422 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 H2AFZP0C0S5 128 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 CST9Q5W186 159 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 SCARA5Q6ZMJ2 495 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 H2AFVQ71UI9 128 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 NOP9Q86U38 636 aaKnown RBP19.03■□□□□ 0.64
NPAS3-202ENST00000356141 VPS36Q86VN1 386 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 SPIRE2Q8WWL2 714 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 SCLT1Q96NL6 688 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 CEP89Q96ST8 783 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 RAB20Q9NX57 234 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 DOCK3Q8IZD9 2030 aa19.03■□□□□ 0.64
NPAS3-202ENST00000356141 ZNFX1Q9P2E3 1918 aaKnown RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 ZSCAN5CA6NGD5 496 aaPredicted RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 ADCY6O43306 1168 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 ARL2P36404 184 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 PRPF4BQ13523 1007 aaKnown RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 NFIL3Q16649 462 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 GPR161Q8N6U8 529 aaKnown RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 RABGGTAQ92696 567 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 PCDHB18PQ96TA0 734 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 NTPCRQ9BSD7 190 aaKnown RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 ABCB6Q9NP58 842 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 ESYT3A0FGR9 886 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 GTPBP10A4D1E9 387 aaKnown RBP19.02■□□□□ 0.64
NPAS3-202ENST00000356141 CFHP08603 1231 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 COPB2P35606 906 aa19.02■□□□□ 0.64
NPAS3-202ENST00000356141 PIK3CAP42336 1068 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms