RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 PLIN5Q00G26 463 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 TNFAIP2Q03169 654 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 SLC16A4O15374 487 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 KRT31Q15323 416 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 ZNF746Q6NUN9 644 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 EXD1Q8NHP7 514 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 C17orf80Q9BSJ5 609 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 PCDHB7Q9Y5E2 793 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 PDGFRBP09619 1106 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 DHTKD1Q96HY7 919 aaPredicted RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 EXOSC4Q9NPD3 245 aaKnown RBP18.22■□□□□ 0.51
COL27A1-201ENST00000356083 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 MTERF3Q96E29 417 aa18.22■□□□□ 0.51
COL27A1-201ENST00000356083 TOMM70O94826 608 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 SMIM5Q71RC9 77 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 CDR2LQ86X02 465 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 CMA1P23946 247 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 FLCNQ8NFG4 579 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 AK8Q96MA6 479 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 MTIF3Q9H2K0 278 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ADAMTS1Q9UHI8 967 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 LAD1O00515 517 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 PBLDP30039 288 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 TRAF7Q6Q0C0 670 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 HORMAD1Q86X24 394 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 NEK9Q8TD19 979 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ACTR5Q9H9F9 607 aaPredicted RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 STMN3Q9NZ72 180 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 CD274Q9NZQ7 290 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 CNGA3Q16281 694 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 PRR23CQ6ZRP0 262 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 TMC2Q8TDI7 906 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 USP6NLQ92738 828 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 PABPC5Q96DU9 382 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 NR1D1P20393 614 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 OR1G1P47890 313 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ROR1Q01973 937 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 PTRHD1Q6GMV3 140 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 NBPF15Q8N660 670 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 RNASE11Q8TAA1 199 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ASNSP08243 561 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 MAPK9P45984 424 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 ALDH1A3P47895 512 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 TRIM71Q2Q1W2 868 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 TDRD3Q9H7E2 651 aaKnown RBP18.21■□□□□ 0.51
COL27A1-201ENST00000356083 PIM2Q9P1W9 311 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 MAN1B1Q9UKM7 699 aa18.21■□□□□ 0.51
COL27A1-201ENST00000356083 KCNN4O15554 427 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 ATP12AP54707 1039 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 BTN2A1Q7KYR7 527 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 TADA1Q96BN2 335 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SLC9A2Q9UBY0 812 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 NFIBO00712 420 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 KRT38O76015 456 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 RALBP11234 206 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 CAMKK1Q8N5S9 505 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SAAL1Q96ER3 474 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 GCOM2Q9BZD3 368 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 KLHL11Q9NVR0 708 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 PSD3Q9NYI0 1048 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 ZC3H7BQ9UGR2 993 aaKnown RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 TEX28O15482 410 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 MMEP08473 750 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 PPP1R2P3Q6NXS1 205 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 PUS3Q9BZE2 481 aaKnown RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 STAP1Q9ULZ2 295 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 ANGPT2O15123 496 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 FYNP06241 537 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SDC4P31431 198 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 NCKAP1LP55160 1127 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SH3BP5LQ7L8J4 393 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 UXS1Q8NBZ7 420 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 TNPO2O14787 897 aaKnown RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 PRKAB2O43741 272 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 TCN1P20061 433 aaPredicted RBP18.2■□□□□ 0.5
COL27A1-201ENST00000356083 ETFBP38117 255 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 TPI1P60174 286 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SOX13Q9UN79 622 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 PRAMEF22A3QJZ6 481 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 MMP10P09238 476 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 S100A5P33763 92 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 ADCY2Q08462 1091 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 SPACA7Q96KW9 195 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 NUP85Q9BW27 656 aa18.2■□□□□ 0.5
COL27A1-201ENST00000356083 FLT3P36888 993 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 SESN2P58004 480 aaPredicted RBP18.19■□□□□ 0.5
COL27A1-201ENST00000356083 CEP55Q53EZ4 464 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 AHI1Q8N157 1196 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 GPR63Q9BZJ6 419 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 TMEM63CQ9P1W3 806 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 POTEB3A0JP26 581 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 SASH1O94885 1247 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 PDE8BO95263 885 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 APRTP07741 180 aa18.19■□□□□ 0.5
COL27A1-201ENST00000356083 POTEBQ6S5H4 581 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms