RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 SMAD1Q15797 465 aaKnown RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 KRT39Q6A163 491 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 CACNA2D3Q8IZS8 1091 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ZBTB45Q96K62 511 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 POLR3FQ9H1D9 316 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SHBGP04278 402 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ADRB2P07550 413 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 NPTX2P47972 431 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 TRPC3Q13507 836 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 HYIQ5T013 277 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 GADL1Q6ZQY3 521 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 NOP9Q86U38 636 aaKnown RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 HOOK3Q86VS8 718 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 MICALL2Q8IY33 904 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ZNF473Q8WTR7 871 aaKnown RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 C9orf72Q96LT7 481 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SEMA4AQ9H3S1 761 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ZNF408Q9H9D4 720 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 TRPC6Q9Y210 931 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ECEL1O95672 775 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 MYCNP04198 464 aaPredicted RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 PYGMP11217 842 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SCP2P22307 547 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 EPS8L3Q8TE67 593 aaKnown RBP13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 WNK4Q96J92 1243 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 VPS37BQ9H9H4 285 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 MYOZ2Q9NPC6 264 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SIX2Q9NPC8 291 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SAMD15Q9P1V8 674 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 ZNRF3Q9ULT6 936 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 COG5Q9UP83 839 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 AGTPBP1Q9UPW5 1226 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 RIPK3Q9Y572 518 aa13.04□□□□□ -0.32
SIRPA-201ENST00000356025 HMGB1P1B2RPK0 211 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 NOP56O00567 594 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 PIAS1O75925 651 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 VIL1P09327 827 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 TMEM253P0C7T8 217 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 PPATQ06203 517 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 MKRN3Q13064 507 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 SLC15A2Q16348 729 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 MOXD1Q6UVY6 613 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 CCDC91Q7Z6B0 441 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 FBXL13Q8NEE6 735 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 NLRP4Q96MN2 994 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 DEFB129Q9H1M3 183 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 BAIAP2L1Q9UHR4 511 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 STK38LQ9Y2H1 464 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 HNRNPH1P31943 449 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RWDD2BP57060 319 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RHOT2Q8IXI1 618 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 TBC1D31Q96DN5 1066 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 SUCLA2Q9P2R7 463 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 TELO2Q9Y4R8 837 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 PCDHA10Q9Y5I2 948 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 INO80B-WBP1J3KQ70 363 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RASGRF2O14827 1237 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RGL2O15211 777 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 PPP2R2AP63151 447 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RTKN2Q8IZC4 609 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 ATP6V0A1Q93050 837 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 MSTO1Q9BUK6 570 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 INO80BQ9C086 356 aaPredicted RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 CD248Q9HCU0 757 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 RAB20Q9NX57 234 aa13.03□□□□□ -0.32
SIRPA-201ENST00000356025 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.03□□□□□ -0.32
SIRPA-201ENST00000356025 EIF3DO15371 548 aaKnown RBP eCLIP13.02□□□□□ -0.32
SIRPA-201ENST00000356025 RPSAP08865 295 aaKnown RBP13.02□□□□□ -0.32
SIRPA-201ENST00000356025 CLTAP09496 248 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 KRT15P19012 456 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 CIITAP33076 1130 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 COBLL1Q53SF7 1204 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 GKAP1Q5VSY0 366 aaPredicted RBP13.02□□□□□ -0.32
SIRPA-201ENST00000356025 FAM47EQ6ZV65 393 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 MYCBPQ99417 103 aaPredicted RBP13.02□□□□□ -0.32
SIRPA-201ENST00000356025 PSMD1Q99460 953 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 ADAM22Q9P0K1 906 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.02□□□□□ -0.32
SIRPA-201ENST00000356025 A0A1B0GUL6 1792 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 ECM29Q5VYK3 1845 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 LRP5O75197 1615 aa13.02□□□□□ -0.32
SIRPA-201ENST00000356025 WDR91A4D1P6 747 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 ICAM1P05362 532 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 VCAM1P19320 739 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 IFI35P80217 286 aaPredicted RBP13.02□□□□□ -0.33
SIRPA-201ENST00000356025 ZNF844Q08AG5 666 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 TNFAIP1Q13829 316 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 KYNUQ16719 465 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 SV2AQ7L0J3 742 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 DAW1Q8N136 415 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 TCP11Q8WWU5 503 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 SLC7A3Q8WY07 619 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 SEMA4DQ92854 862 aa13.02□□□□□ -0.33
SIRPA-201ENST00000356025 IWS1Q96ST2 819 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms