RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 UBE2TQ9NPD8 197 aaPredicted RBP12.24□□□□□ -0.45
CAPN9-202ENST00000354537 RGL1Q9NZL6 768 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 POLLQ9UGP5 575 aa12.24□□□□□ -0.45
CAPN9-202ENST00000354537 E7ENQ6 273 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 UBAP1LF5GYI3 381 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 TRIM49P0CI25 452 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 TRIM49CP0CI26 452 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SLCO1A2P46721 670 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 MARCKSL1P49006 195 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CYP2J2P51589 502 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 KCNJ2P63252 427 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 GTF2IP78347 998 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 MESDQ14696 234 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 NAA25Q14CX7 972 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 PARP6Q2NL67 630 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 PRR5LQ6MZQ0 368 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 FAM71AQ8IYT1 594 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 RIBC1Q8N443 379 aaPredicted RBP12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SLC20A1Q8WUM9 679 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 FGFR1OP2Q9NVK5 253 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 NOCTQ9UK39 431 aaKnown RBP12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SFI1A8K8P3 1242 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SORBS3O60504 671 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CHRNB2P17787 502 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 MSH2P43246 934 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 PRELPP51888 382 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SLC18A1P54219 525 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 ATP11AP98196 1134 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 COG2Q14746 738 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SPDYAQ5MJ70 313 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SYDE2Q5VT97 1194 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 NUGGCQ68CJ6 796 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CHADLQ6NUI6 762 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CFAP61Q8NHU2 1237 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 SNF8Q96H20 258 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CCDC77Q9BR77 488 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 WDR11Q9BZH6 1224 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CCDC113Q9H0I3 377 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 BCAS3Q9H6U6 928 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 KLHL14Q9P2G3 628 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 ADGRA3Q8IWK6 1321 aa12.23□□□□□ -0.45
CAPN9-202ENST00000354537 CCDC189A1A4V9 331 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 ANKRD63C9JTQ0 380 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 TP73O15350 636 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 SPOPO43791 374 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 LUC7L3O95232 432 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 RPSAP08865 295 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 CALRP27797 417 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 POLD1P28340 1107 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 VAMP7P51809 220 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 KCNQ4P56696 695 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 STRN3Q13033 797 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 NR1H3Q13133 447 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 MTFR1Q15390 333 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 ODR4Q5SWX8 454 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 CDC42EP5Q6NZY7 148 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 SLC51AQ86UW1 340 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 ZNF564Q8TBZ8 553 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 PSPC1Q8WXF1 523 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 MRIQ9BWK5 157 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 TXLNGQ9NUQ3 528 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 CCNL1Q9UK58 526 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 LTBP1Q14766 1721 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 KIF3CO14782 793 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 MAGEB2O15479 319 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 ADRA2BP18089 450 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 IRX1P78414 480 aaPredicted RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 STAT4Q14765 748 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 LONRF1Q17RB8 773 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 CMPK2Q5EBM0 449 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 SYCP3Q8IZU3 236 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 LARGE2Q8N3Y3 721 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 EPS8L1Q8TE68 723 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 PIGOQ8TEQ8 1089 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 ZNF622Q969S3 477 aaKnown RBP eCLIP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 FAM81BQ96LP2 452 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 PCDHB18PQ96TA0 734 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 KCNQ5Q9NR82 932 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 SLC5A4Q9NY91 659 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 NKIRAS1Q9NYS0 192 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 RPL26L1Q9UNX3 145 aaKnown RBP12.22□□□□□ -0.45
CAPN9-202ENST00000354537 CD2APQ9Y5K6 639 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 EMSYQ7Z589 1322 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 LRRC37AA6NMS7 1700 aa12.22□□□□□ -0.45
CAPN9-202ENST00000354537 TMEM110-MUSTN1A8MSY1 372 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 PPP1R12AO14974 1030 aaPredicted RBP12.21□□□□□ -0.45
CAPN9-202ENST00000354537 CDH16O75309 829 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 LRRN2O75325 713 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 GAS8O95995 478 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 BRAFP15056 766 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 IVDP26440 423 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 CENPCQ03188 943 aa12.21□□□□□ -0.45
CAPN9-202ENST00000354537 KRT17Q04695 432 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms