RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 MCM3APO60318 1980 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 ARIH2O95376 493 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 CCDC172P0C7W6 258 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 IRX3P78415 501 aaPredicted RBP16.8■□□□□ 0.28
MBD1-205ENST00000353909 MAP9Q49MG5 647 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 SCARA3Q6AZY7 606 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 UPF1Q92900 1129 aaKnown RBP eCLIP16.8■□□□□ 0.28
MBD1-205ENST00000353909 TMEM8AQ9HCN3 771 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 VPS18Q9P253 973 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 TMEM59LQ9UK28 342 aa16.8■□□□□ 0.28
MBD1-205ENST00000353909 NCANO14594 1321 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 A0A0G2JLL6 359 aaPredicted RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 LRRIQ4A6NIV6 560 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 TTLL13PA6NNM8 815 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 HEXIM1O94992 359 aaKnown RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 MMEP08473 750 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 ITGA4P13612 1032 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 YBX3P16989 372 aaKnown RBP eCLIP16.79■□□□□ 0.28
MBD1-205ENST00000353909 RTP1P59025 263 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 NLRP11P59045 1033 aaKnown RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 GUCY2DQ02846 1103 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 SEZ6Q53EL9 994 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 PRRT2Q7Z6L0 340 aaPredicted RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 TRIM50Q86XT4 487 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 FBXL13Q8NEE6 735 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 DHX33Q9H6R0 707 aaKnown RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 EPB41L5Q9HCM4 733 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 RAB20Q9NX57 234 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 COQ4Q9Y3A0 265 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 PTPRJQ12913 1337 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 ANKRD62A6NC57 917 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 RAD51CO43502 376 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 EDNRBP24530 442 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 MCCD1P59942 119 aaPredicted RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 SHC3Q92529 594 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 HES6Q96HZ4 224 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 PORCNQ9H237 461 aa16.79■□□□□ 0.28
MBD1-205ENST00000353909 ZNFX1Q9P2E3 1918 aaKnown RBP16.79■□□□□ 0.28
MBD1-205ENST00000353909 PMM2O15305 246 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 SYF2O95926 243 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 LIG4P49917 911 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 TTLL12Q14166 644 aaPredicted RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 DCAF12L1Q5VU92 463 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 SUCLA2Q9P2R7 463 aaPredicted RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 ADAM21Q9UKJ8 722 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 ZHX1Q9UKY1 873 aaPredicted RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 NFU1Q9UMS0 254 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 NOC2LQ9Y3T9 749 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 NR2E1Q9Y466 385 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 IGKV6D-21A0A0A0MT36 114 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 AGPSO00116 658 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 GGPS1O95749 300 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 FAM153BP0C7A2 387 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 GPC3P51654 580 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 FAM193AP78312 1265 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 FAM153CQ494X1 144 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 CPNE8Q86YQ8 564 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 TMC2Q8TDI7 906 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 IFT81Q8WYA0 676 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 FGD4Q96M96 766 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 TARS2Q9BW92 718 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 FAM153AQ9UHL3 310 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 A0A0G2JMZ2 1700 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 ATP8B3O60423 1300 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 MARK3P27448 753 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 TCF7P36402 384 aaPredicted RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 IREB2P48200 963 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 HSDL1Q3SXM5 330 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 MSL3Q8N5Y2 521 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 TSEN2Q8NCE0 465 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 SCFD2Q8WU76 684 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 LMBR1Q8WVP7 490 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 CDCA5Q96FF9 252 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 DDX47Q9H0S4 455 aaKnown RBP16.78■□□□□ 0.28
MBD1-205ENST00000353909 RBPJLQ9UBG7 517 aa16.78■□□□□ 0.28
MBD1-205ENST00000353909 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
MBD1-205ENST00000353909 SOCS7O14512 581 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 GARTP22102 1010 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 ARL2P36404 184 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 GGCXP38435 758 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 FMO1Q01740 532 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 C9orf131Q5VYM1 1079 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 CRELD2Q6UXH1 353 aaPredicted RBP16.77■□□□□ 0.28
MBD1-205ENST00000353909 SLC7A3Q8WY07 619 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 ISCUQ9H1K1 167 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 ANKFY1Q9P2R3 1169 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 FBXO40Q9UH90 709 aa16.77■□□□□ 0.28
MBD1-205ENST00000353909 ZNF233A6NK53 670 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 DDX3YO15523 660 aaKnown RBP16.77■□□□□ 0.27
MBD1-205ENST00000353909 CYP11B1P15538 503 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 STAT5BP51692 787 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 ZNF211Q13398 564 aaPredicted RBP16.77■□□□□ 0.27
MBD1-205ENST00000353909 NAA35Q5VZE5 725 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 SPOPLQ6IQ16 392 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 AADACL2Q6P093 401 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 ERO1BQ86YB8 467 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 ACTRT1Q8TDG2 376 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 PBKQ96KB5 322 aa16.77■□□□□ 0.27
MBD1-205ENST00000353909 NT5C1BQ96P26 610 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms