RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 PLAAQ9Y263 795 aa9.31□□□□□ -0.92
TRIM55-204ENST00000353317 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
TRIM55-204ENST00000353317 MEFVO15553 781 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 GCNT3O95395 438 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 GNA14O95837 355 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ACTN1P12814 892 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 HNRNPH1P31943 449 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 HSPA9P38646 679 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 KCNH2Q12809 1159 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ADAM9Q13443 819 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 GRB14Q14449 540 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PTGISQ16647 500 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PTPROQ16827 1216 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 CEP85LQ5SZL2 805 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 IRF2BP2Q7Z5L9 587 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 KCTD17Q8N5Z5 321 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ZSWIM2Q8NEG5 633 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 CDHR1Q96JP9 859 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PARK7Q99497 189 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 KIFC3Q9BVG8 833 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PARVGQ9HBI0 331 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 OLFML3Q9NRN5 406 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 IGSF9BQ9UPX0 1349 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 CLIC2O15247 247 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 FAM13AO94988 1023 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PSAPP07602 524 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 SLC9A1P19634 815 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 MDH1P40925 334 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 TNNC1P63316 161 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ASIC2Q16515 512 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 PRAMEF19Q5SWL8 479 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ODR4Q5SWX8 454 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 CYP4F22Q6NT55 531 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 DPY19L2P1Q6NXN4 242 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF571Q7Z3V5 609 aaPredicted RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 MAATS1Q7Z4T9 603 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 C1orf131Q8NDD1 294 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF473Q8WTR7 871 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ISCUQ9H1K1 167 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 CAPN7Q9Y6W3 813 aa9.3□□□□□ -0.92
TRIM55-204ENST00000353317 ATXN2Q99700 1313 aaKnown RBP9.3□□□□□ -0.92
TRIM55-204ENST00000353317 HMGB1P1B2RPK0 211 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TBCAO75347 108 aaKnown RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 KIF4AO95239 1232 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 HPDP32754 393 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TCF7P36402 384 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 HSD17B3P37058 310 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ADCYAP1R1P41586 468 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 FNTAP49354 379 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CASP4P49662 377 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 PPARDQ03181 441 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 HLTFQ14527 1009 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 RPS6KA1Q15418 735 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TAF1CQ15572 869 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 KNOP1Q1ED39 458 aaKnown RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CELF3Q5SZQ8 465 aaKnown RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 C17orf99Q6UX52 265 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 DDX42Q86XP3 938 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ZC3H3Q8IXZ2 948 aaKnown RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 OTUD6BQ8N6M0 293 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 RDM1Q8NG50 284 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 OR2W6PQ8NHA6 318 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 MYCBPAPQ8TBZ2 947 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 SCFD2Q8WU76 684 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 MAML3Q96JK9 1138 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CCT8L2Q96SF2 557 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 GPR20Q99678 358 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 USP20Q9Y2K6 914 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ADGRA3Q8IWK6 1321 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 MGAMO43451 1857 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 BTNL10A8MVZ5 291 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 H0YGN5 161 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 MYO1FO00160 1098 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CES2O00748 559 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TXNP10599 105 aaKnown RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TGFB3P10600 412 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 UCHL3P15374 230 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 COPB2P35606 906 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CCNA1P78396 465 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CRHR2Q13324 411 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 DRP2Q13474 957 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 UAP1Q16222 522 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CCL14Q16627 93 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 BMT2Q1RMZ1 405 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 MTERF2Q49AM1 385 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 METTL7BQ6UX53 244 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 NLRP14Q86W24 1093 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CNPY4Q8N129 248 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 LRRC57Q8N9N7 239 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TAF4BQ92750 862 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 CEP170P1Q96L14 293 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 AP1M1Q9BXS5 423 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 NEUROG2Q9H2A3 272 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 TMBIM4Q9HC24 238 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 PLCB1Q9NQ66 1216 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ZNF302Q9NR11 478 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ANKEF1Q9NU02 776 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 SEPT9Q9UHD8 586 aaPredicted RBP9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ODF2LQ9ULJ1 636 aa9.29□□□□□ -0.92
TRIM55-204ENST00000353317 ABT1Q9ULW3 272 aaKnown RBP9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms