RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 DNAJC19Q96DA6 116 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 BICD1Q96G01 975 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TMEM47Q9BQJ4 181 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 IL17RBQ9NRM6 502 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 PRKAG3Q9UGI9 489 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 NAALADL1Q9UQQ1 740 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 FRMPD2Q68DX3 1309 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 A0A0G2JND7 137 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 BHMG1C9JSJ3 638 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MEIS1O00470 390 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CALUO43852 315 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 GCNT3O95395 438 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TMEM253P0C7T8 217 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 HSPA6P17066 643 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CA4P22748 312 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 PTGIRP43119 386 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 NPEPPSP55786 919 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MECOMQ03112 1051 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 KPNB1Q14974 876 aaKnown RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 CLUL1Q15846 466 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DBN1Q16643 649 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ZC2HC1CQ53FD0 456 aaPredicted RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 SGO2Q562F6 1265 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ZFYVE27Q5T4F4 411 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MFSD5Q6N075 450 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 LRRC74BQ6ZQY2 392 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 MTDHQ86UE4 582 aaKnown RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DTNBP1Q96EV8 351 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 BORCS6Q96GS4 357 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TRAPPC9Q96Q05 1148 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 TFCP2L1Q9NZI6 479 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 DDX25Q9UHL0 483 aaKnown RBP8.16□□□□□ -1.1
BRCA1-201ENST00000352993 ANAPC5Q9UJX4 755 aa8.16□□□□□ -1.1
BRCA1-201ENST00000352993 FAM47DPA6NHR8 397 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 RASA1P20936 1047 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TPP2P29144 1249 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 SOX5P35711 763 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 PABPC4Q13310 644 aaKnown RBP eCLIP8.15□□□□□ -1.13e-11■■□□□ 12.7
BRCA1-201ENST00000352993 SPARCL1Q14515 664 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 UBE2SQ16763 222 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 SLC35G1Q2M3R5 365 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 OR52E8Q6IFG1 317 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 DSTYKQ6XUX3 929 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 RNF207Q6ZRF8 634 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 PRUNE1Q86TP1 453 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 INPP5DQ92835 1189 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 ABTB1Q969K4 478 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 CRAMP1Q96RY5 1269 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 SPZ1Q9BXG8 430 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 CCDC87Q9NVE4 849 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 ZBTB1Q9Y2K1 713 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TJP1Q07157 1748 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 ATMINO43313 823 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TJP3O95049 919 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 COMTP21964 271 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 RPL13P26373 211 aaKnown RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 PTPN4P29074 926 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 CETN2P41208 172 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 ADCY7P51828 1080 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 CASP5P51878 434 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 OVGP1Q12889 678 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 ANKLE1Q8NAG6 615 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 BTBD6Q96KE9 485 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 SMC6Q96SB8 1091 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TMEM109Q9BVC6 243 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 GALNT8Q9NY28 637 aa8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TRPC5Q9UL62 973 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 TTC7AQ9ULT0 858 aaPredicted RBP8.15□□□□□ -1.1
BRCA1-201ENST00000352993 SMAPO00193 183 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 AKAP3O75969 853 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 BAG3O95817 575 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 FTLP02792 175 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-201ENST00000352993 PYGMP11217 842 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 ATF2P15336 505 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 VCAM1P19320 739 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 PRKCIP41743 596 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 VPS72Q15906 364 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.15□□□□□ -1.11
BRCA1-201ENST00000352993 NSMFQ6X4W1 530 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 NLRP9Q7RTR0 991 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 FRMD5Q7Z6J6 570 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 SFR1Q86XK3 245 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 ART4Q93070 314 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 TTC1Q99614 292 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 DMAP1Q9NPF5 467 aaPredicted RBP8.15□□□□□ -1.11
BRCA1-201ENST00000352993 PRDM11Q9NQV5 511 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 PICK1Q9NRD5 415 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 ATP8A2Q9NTI2 1148 aa8.15□□□□□ -1.11
BRCA1-201ENST00000352993 LARSQ9P2J5 1176 aaKnown RBP8.15□□□□□ -1.11
BRCA1-201ENST00000352993 EXOC1LA0A1B0GW35 172 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 SFI1A8K8P3 1242 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CLDN3O15551 220 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 CDH16O75309 829 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 TTC4O95801 387 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 NR3C1P04150 777 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 ZBTB48P10074 688 aaPredicted RBP8.14□□□□□ -1.11
BRCA1-201ENST00000352993 PRDX5P30044 214 aa8.14□□□□□ -1.11
BRCA1-201ENST00000352993 FXR2P51116 673 aaKnown RBP eCLIP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms