RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 HLA-DRAP01903 254 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 KLRC1P26715 233 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 PDE1BQ01064 536 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 MKRN4PQ13434 485 aaPredicted RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 A1CFQ9NQ94 594 aaKnown RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 AGPAT3Q9NRZ7 376 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 GOLGA8MH3BSY2 632 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 EVI5O60447 810 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 SYT17Q9BSW7 474 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 TIPINQ9BVW5 301 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 AGO4Q9HCK5 861 aaKnown RBP14.63□□□□□ -0.07
SMC6-201ENST00000351948 KCND2Q9NZV8 630 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 PEAK1Q9H792 1746 aa14.63□□□□□ -0.07
SMC6-201ENST00000351948 ADORA2AP29274 412 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 CPT1AP50416 773 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 LMNB2Q03252 620 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 PRPSAP1Q14558 356 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 PCNX4Q63HM2 1172 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 ILDR1Q86SU0 546 aaPredicted RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 AGPAT1Q99943 283 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 PFDN4Q9NQP4 134 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 CALB1P05937 261 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 NAA30Q147X3 362 aaPredicted RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 ELMO3Q96BJ8 720 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 POP1Q99575 1024 aaKnown RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 CCDC68Q9H2F9 335 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 NFU1Q9UMS0 254 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 MON2Q7Z3U7 1717 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 ASTN2O75129 1339 aaPredicted RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 I3L4J1 428 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 ATMINO43313 823 aaPredicted RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 HP1BP3Q5SSJ5 553 aaPredicted RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 PPP1R2P3Q6NXS1 205 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 GSPT2Q8IYD1 628 aaKnown RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 CPP00450 1065 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 NPTX2P47972 431 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 BBS5Q8N3I7 341 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 ZNF560Q96MR9 790 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 GCNAQ96QF7 691 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 DDX47Q9H0S4 455 aaKnown RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 SETD4Q9NVD3 440 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 CXCL11O14625 94 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 SLC16A3O15427 465 aaKnown RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 ZNF131P52739 623 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 GIT2Q14161 759 aa14.62□□□□□ -0.07
SMC6-201ENST00000351948 PAN2Q504Q3 1202 aaKnown RBP14.62□□□□□ -0.07
SMC6-201ENST00000351948 PI4K2BG5E9Z4 385 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 INHBAP08476 426 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 RBP5P82980 135 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 EDRF1Q3B7T1 1238 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 RNF180Q86T96 592 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 VPS33BQ9H267 617 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 TADA2AO75478 443 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 ACSL3O95573 720 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 TFRCP02786 760 aaKnown RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 NOP14P78316 857 aaKnown RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 NR1I3Q14994 352 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 RBBP8NLQ8NC74 664 aaPredicted RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 CPB2Q96IY4 423 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 RILPQ96NA2 401 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 WDR24Q96S15 920 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 DHX35Q9H5Z1 703 aaKnown RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 VSIG1Q86XK7 387 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 MCUQ8NE86 351 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 CFAP36Q96G28 342 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 GOLPH3Q9H4A6 298 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 PRMT7Q9NVM4 692 aaPredicted RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 C17orf102A2RUQ5 167 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 ITGA4P13612 1032 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 FGFR4P22455 802 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 OR1G1P47890 313 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 FKBP1AP62942 108 aaKnown RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 GNGT1P63211 74 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 MMS22LQ6ZRQ5 1243 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 USP50Q70EL3 339 aaPredicted RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 BBOF1Q8ND07 529 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 APPL2Q8NEU8 664 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 PDCD6IPQ8WUM4 868 aaKnown RBP14.61□□□□□ -0.07
SMC6-201ENST00000351948 FAM114A2Q9NRY5 505 aa14.61□□□□□ -0.07
SMC6-201ENST00000351948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.61□□□□□ -0.07
SMC6-201ENST00000351948 ZNF541Q9H0D2 1346 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 EML1O00423 815 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 PEX10O60683 326 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 SCP2P22307 547 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 C2CD6Q53TS8 623 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 FKBP1CQ5VVH2 108 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 RAPH1Q70E73 1250 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 CABS1Q96KC9 395 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 ASNSD1Q9NWL6 643 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 LTN1O94822 1766 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 ATP1A1P05023 1023 aaKnown RBP14.6□□□□□ -0.07
SMC6-201ENST00000351948 CYP2C19P33261 490 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 DLK2Q6UY11 383 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 CROCCP2Q86T23 111 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 HPSEQ9Y251 543 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 NALCNQ8IZF0 1738 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 H3BRB1 525 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 ITGB3P05106 788 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 GRIK1P39086 918 aa14.6□□□□□ -0.07
SMC6-201ENST00000351948 EPHB1P54762 984 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms