RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 TARS2Q9BW92 718 aaKnown RBP24.28■■□□□ 1.48
SNX3-202ENST00000349379 CUEDC2Q9H467 287 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 MIOSQ9NXC5 875 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 LZTS1Q9Y250 596 aa24.28■■□□□ 1.48
SNX3-202ENST00000349379 CARNS1A5YM72 827 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 TRAK2O60296 914 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 TBCAO75347 108 aaKnown RBP24.27■■□□□ 1.48
SNX3-202ENST00000349379 DDHD2O94830 711 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 AKAP5P24588 427 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 DYMQ7RTS9 669 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 ZNF280BQ86YH2 543 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 THNSL1Q8IYQ7 743 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 MYCT1Q8N699 235 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 ZFP42Q96MM3 310 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 APOL6Q9BWW8 343 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 KBTBD4Q9NVX7 518 aa24.27■■□□□ 1.48
SNX3-202ENST00000349379 FRMD3A2A2Y4 597 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 ZC3H11AO75152 810 aaKnown RBP eCLIP24.26■■□□□ 1.47
SNX3-202ENST00000349379 GALTP07902 379 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 NUCB2P80303 420 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 DSC1Q08554 894 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 STRN3Q13033 797 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 ZPBP2Q6X784 338 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 MRPS27Q92552 414 aaKnown RBP24.26■■□□□ 1.47
SNX3-202ENST00000349379 SPATA32Q96LK8 384 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 TMEM175Q9BSA9 504 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 CDT1Q9H211 546 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 TNMDQ9H2S6 317 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 ST6GALNAC4Q9H4F1 302 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 NSUN3Q9H649 340 aaKnown RBP24.26■■□□□ 1.47
SNX3-202ENST00000349379 PRDM6Q9NQX0 595 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 SNTG2Q9NY99 539 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 SPG21Q9NZD8 308 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 DNAJB4Q9UDY4 337 aa24.26■■□□□ 1.47
SNX3-202ENST00000349379 RECQL4O94761 1208 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 POMCP01189 267 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 SCNN1GP51170 649 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 RNASELQ05823 741 aaKnown RBP24.25■■□□□ 1.47
SNX3-202ENST00000349379 ZNF568Q3ZCX4 644 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 TMEM173Q86WV6 379 aaPredicted RBP24.25■■□□□ 1.47
SNX3-202ENST00000349379 FAM178BQ8IXR5 827 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 IQUBQ8NA54 791 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 SEL1LQ9UBV2 794 aa24.25■■□□□ 1.47
SNX3-202ENST00000349379 SPTBN5Q9NRC6 3674 aaKnown RBP24.24■■□□□ 1.47
SNX3-202ENST00000349379 ANK1P16157 1881 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 K7ENM7 598 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 TOM1L1O75674 476 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 PIGRP01833 764 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 IRS1P35568 1242 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 SLC11A1P49279 550 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 ALDH7A1P49419 539 aaKnown RBP24.24■■□□□ 1.47
SNX3-202ENST00000349379 GTF2BQ00403 316 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 COL19A1Q14993 1142 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 TCEAL5Q5H9L2 206 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 ADALQ6DHV7 355 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 MPZL3Q6UWV2 235 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 APBB1IPQ7Z5R6 666 aaPredicted RBP24.24■■□□□ 1.47
SNX3-202ENST00000349379 SFR1Q86XK3 245 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 COLGALT2Q8IYK4 626 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 SLC17A8Q8NDX2 589 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 DHX58Q96C10 678 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 ZHX3Q9H4I2 956 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 FAM13BQ9NYF5 915 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 PARP2Q9UGN5 583 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 TBX20Q9UMR3 447 aa24.24■■□□□ 1.47
SNX3-202ENST00000349379 NT5C1B-RDH14C9J2C7 533 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 FSCN2O14926 492 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 POLR2DO15514 142 aaKnown RBP24.23■■□□□ 1.47
SNX3-202ENST00000349379 PPP1R37O75864 691 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 MCF2P10911 925 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 GAP43P17677 238 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 ABCD1P33897 745 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 GRM5P41594 1212 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 GRIK3Q13003 919 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 CNNM4Q6P4Q7 775 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 PHF6Q8IWS0 365 aaKnown RBP eCLIP24.23■■□□□ 1.47
SNX3-202ENST00000349379 CEP120Q8N960 986 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 ZBTB45Q96K62 511 aaPredicted RBP24.23■■□□□ 1.47
SNX3-202ENST00000349379 STRA6Q9BX79 667 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 SCAND2PQ9GZW5 306 aaPredicted RBP24.23■■□□□ 1.47
SNX3-202ENST00000349379 GBP3Q9H0R5 595 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 MAGEF1Q9HAY2 307 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 TLR9Q9NR96 1032 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 KLK14Q9P0G3 267 aa24.23■■□□□ 1.47
SNX3-202ENST00000349379 PTGESO14684 152 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 CMA1P23946 247 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 NMT1P30419 496 aaKnown RBP24.22■■□□□ 1.47
SNX3-202ENST00000349379 ERVFC1P60507 584 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 ZNF720Q7Z2F6 126 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 MAP4K3Q8IVH8 894 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 BCL7CQ8WUZ0 217 aaPredicted RBP24.22■■□□□ 1.47
SNX3-202ENST00000349379 IGSF21Q96ID5 467 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 TRIM9Q9C026 710 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 CXCL16Q9H2A7 254 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 OLFML3Q9NRN5 406 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 THEGQ9P2T0 379 aa24.22■■□□□ 1.47
SNX3-202ENST00000349379 UNC80Q8N2C7 3258 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 KRT17Q04695 432 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 MCL1Q07820 350 aa24.21■■□□□ 1.47
SNX3-202ENST00000349379 NAB2Q15742 525 aa24.21■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms