RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SMYD4Q8IYR2 804 aaPredicted RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 NUP93Q8N1F7 819 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 MRPL40Q9NQ50 206 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 STK17AQ9UEE5 414 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 PCDHGA4Q9Y5G9 962 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 HMGB3O15347 200 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ALDH1A2O94788 518 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 USP39Q53GS9 565 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 GLI2P10070 1586 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 POTEFA5A3E0 1075 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 TSC22D2O75157 780 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 SOX11P35716 441 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 MAPRE1Q15691 268 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 RC3H1Q5TC82 1133 aaKnown RBP12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ANKS6Q68DC2 871 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 MTERF3Q96E29 417 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 FOPNLQ96NB1 174 aa12.49□□□□□ -0.41
TRAF3-201ENST00000347662 A0A087WWV3 80 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 KPNA7A9QM74 516 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 IPO5O00410 1097 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 GUCY2CP25092 1073 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 OR6P1Q8NGX9 317 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 UBE2Q2Q8WVN8 375 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 TSEN34Q9BSV6 310 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CYP4F11Q9HBI6 524 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PRR23AA6NEV1 266 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 FAM47E-STBD1D6RA91 191 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PLEKHA8P1O95397 391 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ST8SIA6P61647 398 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CEP95Q96GE4 821 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ATXN7L3BQ96GX2 97 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 MAD2L2Q9UI95 211 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 EIF4E1BA6NMX2 242 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 SFI1A8K8P3 1242 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ZNF394Q53GI3 561 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CENPPQ6IPU0 288 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 TRIM48Q8IWZ4 208 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CCDC51Q96ER9 411 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CNOT6LQ96LI5 555 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 REXO4Q9GZR2 422 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 NR2F2P24468 414 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 HMOX2P30519 316 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PKP1Q13835 747 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CTTNQ14247 550 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 TEDDM1Q5T9Z0 273 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 GINS4Q9BRT9 223 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 FAM129AQ9BZQ8 928 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 STAP2Q9UGK3 403 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 RASSF9O75901 435 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 MOCS2O96007 188 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 HOXD10P28358 340 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 AKT1P31749 480 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 RAD51Q06609 339 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 SDE2Q6IQ49 451 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ERICH1Q86X53 443 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ST13P5Q8NFI4 369 aaPredicted RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PPP1R13BQ96KQ4 1090 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PCDHA7Q9UN72 937 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PLA2R1Q13018 1463 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PNMA6FA0A0J9YX94 578 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 P4HA2O15460 535 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 MLNP12872 115 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CYP27A1Q02318 531 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CATSPER4Q7RTX7 472 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 UNC45BQ8IWX7 931 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 PIGOQ8TEQ8 1089 aa12.48□□□□□ -0.41
TRAF3-201ENST00000347662 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
TRAF3-201ENST00000347662 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 GNAT1P11488 350 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 ATP12AP54707 1039 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 GABPB1Q06547 395 aaPredicted RBP12.47□□□□□ -0.41
TRAF3-201ENST00000347662 STRBPQ96SI9 672 aaKnown RBP12.47□□□□□ -0.41
TRAF3-201ENST00000347662 SLC13A1Q9BZW2 595 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
TRAF3-201ENST00000347662 SLC25A24Q6NUK1 477 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 LINC00116Q8NCU8 138 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 PSAPP07602 524 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 HMGCS2P54868 508 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 MTMR6Q9Y217 621 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 RANBP1P43487 201 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 COMMD2Q86X83 199 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 UNC45AQ9H3U1 944 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 K7ERI5 159 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 TNPO2O14787 897 aaKnown RBP12.47□□□□□ -0.41
TRAF3-201ENST00000347662 CPB1P15086 417 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 CCDC149Q6ZUS6 474 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 SPATA31A1Q5TZJ5 1347 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L15C9J2P7 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L13C9JLJ4 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L11C9JVI0 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L18D6R9N7 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L22D6RA61 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L17D6RBQ6 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L19D6RCP7 530 aa12.47□□□□□ -0.41
TRAF3-201ENST00000347662 USP17L20D6RJB6 530 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms