RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 PABPC5Q96DU9 382 aaKnown RBP17.73■□□□□ 0.43
RAB5C-201ENST00000346213 RAB34Q9BZG1 259 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 TLR9Q9NR96 1032 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 CLDND1Q9NY35 253 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 COG5Q9UP83 839 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 PCDHB12Q9Y5F1 795 aa17.73■□□□□ 0.43
RAB5C-201ENST00000346213 AXLP30530 894 aa17.72■□□□□ 0.43
RAB5C-201ENST00000346213 MCM6Q14566 821 aa17.72■□□□□ 0.43
RAB5C-201ENST00000346213 CCDC183Q5T5S1 534 aa17.72■□□□□ 0.43
RAB5C-201ENST00000346213 ARHGAP28Q9P2N2 729 aa17.72■□□□□ 0.43
RAB5C-201ENST00000346213 SSBP05455 408 aaKnown RBP eCLIP17.71■□□□□ 0.43
RAB5C-201ENST00000346213 GUCY2CP25092 1073 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 DSC1Q08554 894 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 ADAM15Q13444 863 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 KCNC3Q14003 757 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 LEXMQ3ZCV2 418 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 SLC27A1Q6PCB7 646 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 LRSAM1Q6UWE0 723 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 DEPTORQ8TB45 409 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 TCF25Q9BQ70 676 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 PAAF1Q9BRP4 392 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 GRPEL1Q9HAV7 217 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 PRMT7Q9NVM4 692 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-201ENST00000346213 SPG21Q9NZD8 308 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 CDH22Q9UJ99 828 aa17.71■□□□□ 0.43
RAB5C-201ENST00000346213 BARX2Q9UMQ3 279 aaPredicted RBP17.71■□□□□ 0.43
RAB5C-201ENST00000346213 ACKR2O00590 384 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 PTGESO14684 152 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 SLC16A4O15374 487 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 LETM1O95202 739 aaPredicted RBP17.71■□□□□ 0.42
RAB5C-201ENST00000346213 EFEMP2O95967 443 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 ITGA4P13612 1032 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 NAB2Q15742 525 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 TAS1R1Q7RTX1 841 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 COLGALT2Q8IYK4 626 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 SYMPKQ92797 1274 aaKnown RBP17.71■□□□□ 0.42
RAB5C-201ENST00000346213 KIFAP3Q92845 792 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 CCDC51Q96ER9 411 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 IGSF21Q96ID5 467 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 MSLNLQ96KJ4 702 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 FIZ1Q96SL8 496 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 REEP2Q9BRK0 252 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 MRPL9Q9BYD2 267 aaKnown RBP17.71■□□□□ 0.42
RAB5C-201ENST00000346213 HAPLN2Q9GZV7 340 aa17.71■□□□□ 0.42
RAB5C-201ENST00000346213 GOLGA6L4A6NEF3 574 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 GRXCR2A6NFK2 248 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 SKIP12755 728 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 PRPF4BQ13523 1007 aaKnown RBP17.7■□□□□ 0.42
RAB5C-201ENST00000346213 PCBP1Q15365 356 aaKnown RBP eCLIP17.7■□□□□ 0.423e-6■■■□□ 17.8
RAB5C-201ENST00000346213 ZBTB8OSQ8IWT0 167 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 PGBD4Q96DM1 585 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 PRIMPOLQ96LW4 560 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 AK8Q96MA6 479 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 PTPRHQ9HD43 1115 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 SNTG2Q9NY99 539 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 LZTS1Q9Y250 596 aa17.7■□□□□ 0.42
RAB5C-201ENST00000346213 SYCE3A1L190 88 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 LONP1P36776 959 aaKnown RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 NASPP49321 788 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 UBE3AQ05086 875 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 DHX8Q14562 1220 aaKnown RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 DUSP6Q16828 381 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 EP400NLQ6ZTU2 488 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 TMEM161BQ8NDZ6 487 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 RAD54LQ92698 747 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 ZBTB45Q96K62 511 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 UHRF1Q96T88 793 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 TARS2Q9BW92 718 aaKnown RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 ZBP1Q9H171 429 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 AAASQ9NRG9 546 aa17.69■□□□□ 0.42
RAB5C-201ENST00000346213 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 SRPRBQ9Y5M8 271 aaKnown RBP17.69■□□□□ 0.42
RAB5C-201ENST00000346213 C2orf71A6NGG8 1288 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 CCDC169A6NNP5 214 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 NRP1O14786 923 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 RECQL4O94761 1208 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 SLC39A14Q15043 492 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 MAPK6Q16659 721 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 GPBP1Q86WP2 473 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 EFHBQ8N7U6 833 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 C2orf40Q9H1Z8 148 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 CDT1Q9H211 546 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 PRG3Q9Y2Y8 225 aaPredicted RBP17.68■□□□□ 0.42
RAB5C-201ENST00000346213 STK24Q9Y6E0 443 aa17.68■□□□□ 0.42
RAB5C-201ENST00000346213 PROZP22891 400 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 GIT2Q14161 759 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 RNF168Q8IYW5 571 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-201ENST00000346213 LINC00301Q8NCQ3 95 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 B3GALT6Q96L58 329 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
RAB5C-201ENST00000346213 CCSER1Q9C0I3 900 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 PHLPP2Q6ZVD8 1323 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 YEATS4O95619 227 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 MAPTP10636 758 aaKnown RBP17.67■□□□□ 0.42
RAB5C-201ENST00000346213 PLS3P13797 630 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 RNASELQ05823 741 aaKnown RBP17.67■□□□□ 0.42
RAB5C-201ENST00000346213 ATF7IP2Q5U623 682 aa17.67■□□□□ 0.42
RAB5C-201ENST00000346213 PTCRAQ6ISU1 281 aaPredicted RBP17.67■□□□□ 0.42
RAB5C-201ENST00000346213 KANK3Q6NY19 840 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms