RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CBWD1Q9BRT8 395 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 PORCNQ9H237 461 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 XPNPEP1Q9NQW7 623 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 ZNF302Q9NR11 478 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 PDLIM7Q9NR12 457 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 FRMD4BQ9Y2L6 1034 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 MAP4K5Q9Y4K4 846 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 EIF3CLB5ME19 914 aaKnown RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 EXOC3O60645 756 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 ARIH2O95376 493 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 DMP1Q13316 513 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 ALCAMQ13740 583 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 KCTD2Q14681 263 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 HGSNATQ68CP4 663 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 LIAT1Q6ZQX7 453 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 SLC9A9Q8IVB4 645 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 PCYT2Q99447 389 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 EIF3CQ99613 913 aaKnown RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 TSPAN10Q9H1Z9 355 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 ST6GALNAC4Q9H4F1 302 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 TMEM206Q9H813 350 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 EFCC1Q9HA90 598 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 GUCA1BQ9UMX6 200 aa10.06□□□□□ -0.8
ATG4A-202ENST00000345734 V9GYY5 206 aaPredicted RBP10.06□□□□□ -0.8
ATG4A-202ENST00000345734 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 ADGRA3Q8IWK6 1321 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 DNAJC25-GNG10A0A024R161 153 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 CCDC66A2RUB6 948 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 DGAT1O75907 488 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 SLU7O95391 586 aaKnown RBP10.05□□□□□ -0.8
ATG4A-202ENST00000345734 GGPS1O95749 300 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 KIF11P52732 1056 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 ARID5AQ03989 594 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 CBWD6Q4V339 395 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 XKR3Q5GH77 459 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 CBWD3Q5JTY5 395 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 CBWD5Q5RIA9 395 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 KLHDC7AQ5VTJ3 777 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 SFMBT2Q5VUG0 894 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 GJB7Q6PEY0 223 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 GBP6Q6ZN66 633 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 KIAA1328Q86T90 577 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 FBXO16Q8IX29 292 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-202ENST00000345734 SLC35F6Q8N357 371 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-202ENST00000345734 LACRTQ9GZZ8 138 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 RRAGCQ9HB90 399 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 ATP6V0A4Q9HBG4 840 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 ETNK1Q9HBU6 452 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 SIX2Q9NPC8 291 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 KMT5AQ9NQR1 393 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 HCSTQ9UBK5 93 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 AJAP1Q9UKB5 411 aaPredicted RBP10.05□□□□□ -0.8
ATG4A-202ENST00000345734 TBX20Q9UMR3 447 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 FHOD1Q9Y613 1164 aa10.05□□□□□ -0.8
ATG4A-202ENST00000345734 IGKV6D-21A0A0A0MT36 114 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 DENND3A2RUS2 1198 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 BTBD19C9JJ37 291 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 PDHXO00330 501 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 UCHL3P15374 230 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 COPB2P35606 906 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 FMO5P49326 533 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 SMTNP53814 917 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 KRT83P78385 493 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 RAPGEF1Q13905 1077 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 TMEM63BQ5T3F8 832 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 CEP120Q8N960 986 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 KIFAP3Q92845 792 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 POLR3FQ9H1D9 316 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 DEF6Q9H4E7 631 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 MROH8Q9H579 483 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 PLCB1Q9NQ66 1216 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 HSPBP1Q9NZL4 362 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 DDX41Q9UJV9 622 aaKnown RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 PLXNB2O15031 1838 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 CCL15-CCL14A0A0B4J2E2 113 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 GOLGA8IPA6NC78 632 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 GOLGA8JA6NMD2 632 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 AKR1B10O60218 316 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 ADSSP30520 456 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 DLG4P78352 724 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 GFPT1Q06210 699 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 NCBP1Q09161 790 aaKnown RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 BFSP1Q12934 665 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 NEDD9Q14511 834 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 EMC2Q15006 297 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 ENOX2Q16206 610 aaKnown RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 CCL15Q16663 113 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 ASTE1Q2TB18 679 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 CCDC122Q5T0U0 273 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 PPP1R26Q5T8A7 1209 aaPredicted RBP10.04□□□□□ -0.8
ATG4A-202ENST00000345734 C12orf56Q8IXR9 622 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 ANKRD13CQ8N6S4 541 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 MCPH1Q8NEM0 835 aa10.04□□□□□ -0.8
ATG4A-202ENST00000345734 BRI3BPQ8WY22 251 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms