RNA–Protein interactions for RNA: ENST00000344935.8

CPSF4L-201, Transcript of cleavage and polyadenylation specific factor 4 like, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CPSF4L, Length 647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4L-201ENST00000344935 GBP3Q9H0R5 595 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 CSRNP2Q9H175 543 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 TBC1D17Q9HA65 648 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 ZSWIM6Q9HCJ5 1215 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 ARHGEF3Q9NR81 526 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 NAP1L2Q9ULW6 460 aaPredicted RBP9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 DOCK6Q96HP0 2047 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 CACNA1BQ00975 2339 aa9.13□□□□□ -0.95
CPSF4L-201ENST00000344935 SF3B1O75533 1304 aaKnown RBP eCLIP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 TPRP12270 2363 aaKnown RBP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 SPDYE4A6NLX3 237 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 SPTLC1O15269 473 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 NARSO43776 548 aaKnown RBP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 CDKL5O76039 1030 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 LAMP2P13473 410 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 ITGA4P13612 1032 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 MLH1P40692 756 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 AK2P54819 239 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 NPEPPSP55786 919 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 MBTD1Q05BQ5 628 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 SSRP1Q08945 709 aaKnown RBP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 TFDP1Q14186 410 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 USP41Q3LFD5 358 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 PDXDC1Q6P996 788 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 PPP4R3CPQ6ZMV5 832 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 RNF149Q8NC42 400 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 PJA1Q8NG27 643 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 HAS1Q92839 578 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 SHDQ96IW2 340 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 MYADMQ96S97 322 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 MTRQ99707 1265 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 NT5C3AQ9H0P0 336 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 ZSWIM4Q9H7M6 989 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 NCOA5Q9HCD5 579 aaKnown RBP9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 XPNPEP1Q9NQW7 623 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 FBXW11Q9UKB1 542 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 ADAM28Q9UKQ2 775 aa9.12□□□□□ -0.95
CPSF4L-201ENST00000344935 PDCD11Q14690 1871 aaKnown RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 A0A1B0GUA9 196 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 CPLX1O14810 134 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 TGM5O43548 720 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 ZMYND10O75800 440 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 DGAT1O75907 488 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 POMCP01189 267 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 GBP2P32456 591 aaPredicted RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 SCNN1GP51170 649 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 NCBP1Q09161 790 aaKnown RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 FAM187BQ17R55 369 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 INF2Q27J81 1249 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 CDCA2Q69YH5 1023 aaPredicted RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 FUT10Q6P4F1 479 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 SLC27A1Q6PCB7 646 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 MTSS1LQ765P7 747 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 ZNF579Q8NAF0 562 aaKnown RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 PIK3R5Q8WYR1 880 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 NELL1Q92832 810 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 TMEM143Q96AN5 459 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 YTHDC1Q96MU7 727 aaKnown RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 GAD1Q99259 594 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 HSD17B14Q9BPX1 270 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 SH2D3AQ9BRG2 576 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 COLEC11Q9BWP8 271 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 EIF2AQ9BY44 585 aaKnown RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 ANKEF1Q9NU02 776 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 DLL3Q9NYJ7 618 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 FBXO4Q9UKT5 387 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 PRG3Q9Y2Y8 225 aaPredicted RBP9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 SIT1Q9Y3P8 196 aa9.11□□□□□ -0.95
CPSF4L-201ENST00000344935 CCDC194A0A1B0GVG4 234 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 TMEM189-UBE2V1I3L0A0 370 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 RFPL2O75678 378 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 SSBP05455 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 CFHP08603 1231 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 SP9P0CG40 484 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 SRGAP2CP0DJJ0 459 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 XRCC6P12956 609 aaKnown RBP eCLIP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 XBP1P17861 261 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 ARF4P18085 180 aaPredicted RBP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 ARL2P36404 184 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 OR1G1P47890 313 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 RBM25P49756 843 aaKnown RBP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 PRKCQQ04759 706 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 ELAVL2Q12926 359 aaKnown RBP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 TUSC3Q13454 348 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 CAPSQ13938 189 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 PUM1Q14671 1186 aaKnown RBP eCLIP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 LONRF3Q496Y0 759 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 TAS1R1Q7RTX1 841 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 C1orf210Q8IVY1 113 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 SUMF1Q8NBK3 374 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 GPR152Q8TDT2 470 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 RUBCNQ92622 972 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 ZFP42Q96MM3 310 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 IER2Q9BTL4 223 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 GPR62Q9BZJ7 368 aa9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 NXF3Q9H4D5 531 aaKnown RBP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 AVENQ9NQS1 362 aaPredicted RBP9.1□□□□□ -0.95
CPSF4L-201ENST00000344935 CDH7Q9ULB5 785 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms