RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 RNF39Q9H2S5 420 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 UBN1Q9NPG3 1134 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 EXOC1Q9NV70 894 aa22.81■■□□□ 1.24
SMARCB1-202ENST00000344921 FNDC1Q4ZHG4 1894 aaPredicted RBP22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 CLDN3O15551 220 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 PRR29P0C7W0 189 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 AKAP5P24588 427 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 CASP5P51878 434 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 Q7L0L9 218 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 SYCP3Q8IZU3 236 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 HVCN1Q96D96 273 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 CASD1Q96PB1 797 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 TGS1Q96RS0 853 aaKnown RBP22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 FGFBP2Q9BYJ0 223 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 RNF19AQ9NV58 838 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 HOOK1Q9UJC3 728 aaKnown RBP22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 EXOC7Q9UPT5 735 aa22.8■■□□□ 1.24
SMARCB1-202ENST00000344921 POSTNQ15063 836 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 DEFB123Q8N688 67 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 ACCSQ96QU6 501 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 CDT1Q9H211 546 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 TTYH1Q9H313 450 aaPredicted RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 SEMA6BQ9H3T3 888 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 PTPRHQ9HD43 1115 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 SNTG2Q9NY99 539 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 GDAQ9Y2T3 454 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 PPP1R37O75864 691 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 PRPF6O94906 941 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 RPN1P04843 607 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 OSTNP61366 133 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 KMT5BQ4FZB7 885 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 L1TD1Q5T7N2 865 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 URGCPQ8TCY9 931 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 ARNTL2Q8WYA1 636 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 TIGD1Q96MW7 591 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 SLC39A2Q9NP94 309 aa22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 TYW1Q9NV66 732 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 MRPL42Q9Y6G3 142 aaKnown RBP22.79■■□□□ 1.24
SMARCB1-202ENST00000344921 GOLGA6L22H0YM25 854 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 OFD1O75665 1012 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 RNASELQ05823 741 aaKnown RBP22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 KCNA1Q09470 495 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 NOLC1Q14978 699 aaKnown RBP eCLIP22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 NOMO2Q5JPE7 1267 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 SPRED2Q7Z698 418 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 THNSL1Q8IYQ7 743 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 LRRC43Q8N309 656 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 C17orf80Q9BSJ5 609 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 STRA6Q9BX79 667 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 MRPL9Q9BYD2 267 aaKnown RBP22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 KLK14Q9P0G3 267 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 GIT1Q9Y2X7 761 aa22.78■■□□□ 1.24
SMARCB1-202ENST00000344921 KLRC4O43908 158 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 MCF2P10911 925 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 PROZP22891 400 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 MLH1P40692 756 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 DPYDQ12882 1025 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 PNOCQ13519 176 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 GLIS3Q8NEA6 775 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 GAD1Q99259 594 aa22.77■■□□□ 1.24
SMARCB1-202ENST00000344921 ARL5CA6NH57 179 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 PIGRP01833 764 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 TMEM192Q8IY95 271 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 RSPH1Q8WYR4 309 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 RPS6KC1Q96S38 1066 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 CCDC94Q9BW85 323 aaPredicted RBP22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 TMEM206Q9H813 350 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 RWDD3Q9Y3V2 267 aa22.77■■□□□ 1.23
SMARCB1-202ENST00000344921 COL4A6Q14031 1691 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 RECQL4O94761 1208 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 POMCP01189 267 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 CTNNB1P35222 781 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 YARSP54577 528 aaKnown RBP22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 ERVK-21P61565 698 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 MCL1Q07820 350 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 EHHADHQ08426 723 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 PSMD2Q13200 908 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 CEP120Q8N960 986 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 ZFP42Q96MM3 310 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 SAMD11Q96NU1 681 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 GBP3Q9H0R5 595 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 AAASQ9NRG9 546 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 KANSL3Q9P2N6 904 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 HCSTQ9UBK5 93 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 CDH23Q9H251 3354 aa22.76■■□□□ 1.23
SMARCB1-202ENST00000344921 ANKRD63C9JTQ0 380 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 ABLIM1O14639 778 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 EIF3DO15371 548 aaKnown RBP eCLIP22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 GRIN2CQ14957 1233 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 EPC2Q52LR7 807 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 SLFN12LQ6IEE8 588 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 LRRC55Q6ZSA7 311 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 CLP1Q92989 425 aaKnown RBP22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 FAM193BQ96PV7 902 aaPredicted RBP22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 MSTO1Q9BUK6 570 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 IKZF4Q9H2S9 585 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 TBC1D13Q9NVG8 400 aa22.75■■□□□ 1.23
SMARCB1-202ENST00000344921 TISP43B9A030 160 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 GRM5P41594 1212 aa22.74■■□□□ 1.23
SMARCB1-202ENST00000344921 AFF1P51825 1210 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms