RNA–Protein interactions for RNA: ENST00000344391.9

CEACAM1-202, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,619 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-202ENST00000344391 HSP90AA2PQ14568 343 aaPredicted RBP17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 EEF1DP3Q658K8 133 aa17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 ZBTB33Q86T24 672 aa17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 CELF4Q9BZC1 486 aaKnown RBP17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 SIK3Q9Y2K2 1263 aa17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.79■□□□□ 0.44
CEACAM1-202ENST00000344391 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 ERLIN2O94905 339 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TRIM49P0CI25 452 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TRIM49CP0CI26 452 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 HSPA1AP0DMV8 641 aaKnown RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 HSPA1BP0DMV9 641 aaKnown RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 FGFR4P22455 802 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 ACOT2P49753 483 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 DLG4P78352 724 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 CYP24A1Q07973 514 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 KCNMA1Q12791 1236 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 NOLC1Q14978 699 aaKnown RBP eCLIP17.78■□□□□ 0.444e-8■□□□□ 10.1
CEACAM1-202ENST00000344391 SNX17Q15036 470 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 PKN2Q16513 984 aaKnown RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TMEM132AQ24JP5 1023 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 HS1BP3Q53T59 392 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 C1orf220Q5T0J3 134 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TMC2Q8TDI7 906 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 PARD3BQ8TEW8 1205 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TMEM40Q8WWA1 233 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TRIM44Q96DX7 344 aaPredicted RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 ZNF333Q96JL9 665 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 PDZD7Q9H5P4 517 aa17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 TRMT13Q9NUP7 481 aaKnown RBP17.78■□□□□ 0.44
CEACAM1-202ENST00000344391 A0A1B0GUA9 196 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 OGTO15294 1046 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 HARSP12081 509 aaKnown RBP17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 KLK7P49862 253 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 PTK7Q13308 1070 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 ZNF568Q3ZCX4 644 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 ZBTB41Q5SVQ8 909 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 CATSPER4Q7RTX7 472 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 CDR2LQ86X02 465 aaPredicted RBP17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 CPB2Q96IY4 423 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 CDT1Q9H211 546 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 TRPV2Q9Y5S1 764 aa17.77■□□□□ 0.44
CEACAM1-202ENST00000344391 GTPBP10A4D1E9 387 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 ARVCFO00192 962 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 GYPCP04921 128 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 FMO5P49326 533 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 RBL2Q08999 1139 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 TRIM14Q14142 442 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 ARID5BQ14865 1188 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 PPFIBP1Q86W92 1011 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 ARMC5Q96C12 935 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 SEZ6LQ9BYH1 1024 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CDY2AQ9Y6F7 541 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 M0QZ92 97 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 MCF2P10911 925 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 SFPQP23246 707 aaKnown RBP eCLIP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 HOXA11P31270 313 aaPredicted RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 PPP3CAQ08209 521 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 NCBP1Q09161 790 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 MGAT3Q09327 533 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 PSMD6Q15008 389 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 TRIM71Q2Q1W2 868 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 SEZ6Q53EL9 994 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 FIGNQ5HY92 759 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 USP37Q86T82 979 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CACTINQ8WUQ7 758 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CCDC127Q96BQ5 260 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 PCMTD1Q96MG8 357 aaPredicted RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CRACR2AQ9BSW2 395 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 NUP58Q9BVL2 599 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 TTYH3Q9C0H2 523 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CRISPLD2Q9H0B8 497 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 RBAKQ9NYW8 714 aaPredicted RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 CPSF3Q9UKF6 684 aaKnown RBP17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
CEACAM1-202ENST00000344391 LRRIQ3A6PVS8 624 aaPredicted RBP17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CHRNA1P02708 482 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 AXLP30530 894 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CASP14P31944 242 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 TNFSF9P41273 254 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CDK7P50613 346 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CBWD6Q4V339 395 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CBWD3Q5JTY5 395 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CBWD5Q5RIA9 395 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 BRSK2Q8IWQ3 736 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 CCDC150Q8NCX0 1101 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 SENP6Q9GZR1 1112 aaPredicted RBP17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 MMRN2Q9H8L6 949 aa17.75■□□□□ 0.43
CEACAM1-202ENST00000344391 RNF225M0QZC1 329 aaPredicted RBP17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 PMM2O15305 246 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 P4HA2O15460 535 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 STX10O60499 249 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 SGPL1O95470 568 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 ANK1P16157 1881 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 THPOP40225 353 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 GCLMP48507 274 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 FXR1P51114 621 aaKnown RBP eCLIP17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 WNT7BP56706 349 aa17.74■□□□□ 0.43
CEACAM1-202ENST00000344391 CLDN10P78369 228 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms