RNA–Protein interactions for RNA: ENST00000342310.7

LMX1A-202, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-202ENST00000342310 SCP2P22307 547 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 MFAP3P55082 362 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ORC2Q13416 577 aaPredicted RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 UGCGQ16739 394 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ATP13A4Q4VNC1 1196 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 INTS8Q75QN2 995 aaKnown RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 CCDC33Q8N5R6 958 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 CCDC197Q8NCU1 140 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 KCNV2Q8TDN2 545 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 HVCN1Q96D96 273 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ROBO3Q96MS0 1386 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 POLGP54098 1239 aaPredicted RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 SMTNL2Q2TAL5 461 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 TRIM68Q6AZZ1 485 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ZKSCAN4Q969J2 545 aaPredicted RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 HSD17B14Q9BPX1 270 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 CXorf56Q9H5V9 222 aa13.44□□□□□ -0.26
LMX1A-202ENST00000342310 ZNF70Q9UC06 446 aaPredicted RBP13.44□□□□□ -0.26
LMX1A-202ENST00000342310 P4HBP07237 508 aaKnown RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ATF2P15336 505 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ADRA2BP18089 450 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 RRM1P23921 792 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 RWDD2BP57060 319 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 SESN3P58005 492 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ITGB3BPQ13352 177 aaPredicted RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 KDM7AQ6ZMT4 941 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 THNSL1Q8IYQ7 743 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 C4orf33Q8N1A6 199 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ZBTB45Q96K62 511 aaPredicted RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 IFT74Q96LB3 600 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PLVAPQ9BX97 442 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ZWILCHQ9H900 591 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 SIX2Q9NPC8 291 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 CHST7Q9NS84 486 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PASKQ96RG2 1323 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 FAM107AO95990 144 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 POTEJP0CG39 1038 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 TFAMQ00059 246 aaKnown RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ANKMY2Q8IV38 441 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PCDHB18PQ96TA0 734 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 NKIRAS1Q9NYS0 192 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 SUCLA2Q9P2R7 463 aaPredicted RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ANAPC5Q9UJX4 755 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 DOT1LQ8TEK3 1739 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 USP54Q70EL1 1684 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 SMCHD1A6NHR9 2005 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 H0Y3Z8 333 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 ADRB2P07550 413 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 HMGCS2P54868 508 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PPP2R5AQ15172 486 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 VSIG1Q86XK7 387 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 LRRN4Q8WUT4 740 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 COL20A1Q9P218 1284 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 SAE1Q9UBE0 346 aaPredicted RBP13.43□□□□□ -0.26
LMX1A-202ENST00000342310 PCSK1NQ9UHG2 260 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 TELO2Q9Y4R8 837 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 CEP350Q5VT06 3117 aa13.43□□□□□ -0.26
LMX1A-202ENST00000342310 LRRD1A4D1F6 860 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 O00370 1275 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 TMEM253P0C7T8 217 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 STRN3Q13033 797 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 MAPK7Q13164 816 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 TTLL12Q14166 644 aaPredicted RBP13.42□□□□□ -0.26
LMX1A-202ENST00000342310 BRDTQ58F21 947 aaPredicted RBP13.42□□□□□ -0.26
LMX1A-202ENST00000342310 DCAF12L1Q5VU92 463 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 LRRC57Q8N9N7 239 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 MICAL1Q8TDZ2 1067 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 ATP8B4Q8TF62 1192 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 ATG4CQ96DT6 458 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 CHMP6Q96FZ7 201 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SH3GL2Q99962 352 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 NCAPGQ9BPX3 1015 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 MAGED2Q9UNF1 606 aaPredicted RBP13.42□□□□□ -0.26
LMX1A-202ENST00000342310 KAT6AQ92794 2004 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 IGKV6D-41A0A0C4DH26 115 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 GAS8O95995 478 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 RARAP10276 462 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 BRAFP15056 766 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 DLK2Q6UY11 383 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 ACTRT1Q8TDG2 376 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 PPP1R13LQ8WUF5 828 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SEMA4DQ92854 862 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 IMPG2Q9BZV3 1241 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 VCPKMTQ9H867 229 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 KLC4Q9NSK0 619 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 LCA5LO95447 670 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 ZSCAN5DPP0CG00 497 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 HSPA9P38646 679 aaKnown RBP13.42□□□□□ -0.26
LMX1A-202ENST00000342310 RARRES1P49788 294 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SPRED3Q2MJR0 410 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 BSPRYQ5W0U4 402 aa13.42□□□□□ -0.26
LMX1A-202ENST00000342310 SNRNP48Q6IEG0 339 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms